values.yaml

# Default values for indexd.
# This is a YAML-formatted file.
# Declare variables to be passed into your templates.

# Global configuration
global:
  # -- (map) AWS configuration
  aws:
    # -- (bool) Set to true if deploying to AWS. Controls ingress annotations.
    enabled: false
    # -- (string) Credentials for AWS stuff.
    awsAccessKeyId:
    # -- (string) Credentials for AWS stuff.
    awsSecretAccessKey:
  # -- (bool) Whether the deployment is for development purposes.
  dev: true

  postgres:
    # -- (bool) Whether the database should be created.
    dbCreate: true
    # -- (string) Name of external secret. Disabled if empty
    externalSecret: ""
    # -- (map) Master credentials to postgres. This is going to be the default postgres server being used for each service, unless each service specifies their own postgres
    master:
      # -- (string) hostname of postgres server
      host:
      # -- (string) username of superuser in postgres. This is used to create or restore databases
      username: postgres
      # -- (string) password for superuser in postgres. This is used to create or restore databases
      password:
      # -- (string) Port for Postgres.
      port: "5432"
  # -- (string) Environment name. This should be the same as vpcname if you're doing an AWS deployment. Currently this is being used to share ALB's if you have multiple namespaces. Might be used other places too.
  environment: default
  # -- (string) Hostname for the deployment.
  hostname: localhost
  # -- (string) ARN of the reverse proxy certificate.
  revproxyArn: arn:aws:acm:us-east-1:123456:certificate
  # -- (string) URL of the data dictionary.
  dictionaryUrl: https://s3.amazonaws.com/dictionary-artifacts/datadictionary/develop/schema.json
  # -- (string) Portal application name.
  portalApp: gitops
  # -- (string) S3 bucket name for Kubernetes manifest files.
  kubeBucket: kube-gen3
  # -- (string) S3 bucket name for log files.
  logsBucket: logs-gen3
  # -- (bool) Whether public datasets are enabled.
  publicDataSets: true
  # -- (string) Access level for tiers. acceptable values for `tier_access_level` are: `libre`, `regular` and `private`. If omitted, by default common will be treated as `private`
  tierAccessLevel: libre
  # -- (int) Only relevant if tireAccessLevel is set to "regular". Summary charts below this limit will not appear for aggregated data.
  tierAccessLimit: "1000"
  # -- (map) Controls network policy settings
  netPolicy:
    enabled: false
  # -- (int) Number of dispatcher jobs.
  dispatcherJobNum: "10"
  # -- (bool) If the service will be deployed with a Pod Disruption Budget. Note- you need to have more than 2 replicas for the pdb to be deployed.
  pdb: false
  # -- (int) The minimum amount of pods that are available at all times if the PDB is deployed.
  minAvialable: 1
  # -- (map) External Secrets settings.
  externalSecrets:
    # -- (bool) Will use ExternalSecret resources to pull secrets from Secrets Manager instead of creating them locally. Be cautious as this will override any indexd secrets you have deployed.
    deploy: false
    # -- (string) Will deploy a separate External Secret Store for this service.
    separateSecretStore: false

# -- (bool) Whether Metrics are enabled.
metricsEnabled: false

# -- (map) Configuration for network policies created by this chart. Only relevant if "global.netPolicy.enabled" is set to true
netPolicy:
  # -- (array) List of app labels that require ingress to this service
  ingressApps:
    - fence
    - presigned-url-fence
    - fenceshib
    - peregrine
    - sheepdog
    - ssjdispatcherjob
    - metadata
    - mariner
    - mariner-engine

  # -- (array) List of apps that this app requires egress to
  egressApps:
    - fence
    - presigned-url-fence
    - fenceshib
    - peregrine
    - sheepdog
    - ssjdispatcherjob
    - metadata
    - mariner
    - mariner-engine

# -- (map) External Secrets settings.
externalSecrets:
  # -- (string) Will create the Helm "indexd-service-creds" secret even if Secrets Manager is enabled. This is helpful if you are wanting to use External Secrets for some, but not all secrets.
  createK8sServiceCredsSecret: false
  # -- (string) Will override the name of the aws secrets manager secret. Default is "Values.global.environment-.Chart.Name-creds"
  dbcreds:
  serviceCreds: "indexd-service-creds"

# -- (map) Values for indexd secret.
secrets:
  userdb:
    fence:
    sheepdog:
    # gateway:
  # -- (str) AWS access key ID to access the db restore job S3 bucket. Overrides global key.
  awsAccessKeyId:
  # -- (str) AWS secret access key ID to access the db restore job S3 bucket. Overrides global key.
  awsSecretAccessKey:

# -- (map) Postgres database configuration. If db does not exist in postgres cluster and dbCreate is set ot true then these databases will be created for you
postgres:
  # (bool) Whether the database should be restored from s3. Default to global.postgres.dbRestore
  dbRestore: false
  # -- (bool) Whether the database should be created. Default to global.postgres.dbCreate
  dbCreate:
  # -- (string) Hostname for postgres server. This is a service override, defaults to global.postgres.host
  host:
  # -- (string) Database name for postgres. This is a service override, defaults to <serviceName>-<releaseName>
  database:
  # -- (string) Username for postgres. This is a service override, defaults to <serviceName>-<releaseName>
  username:
  # -- (string) Port for Postgres.
  port: "5432"
  # -- (string) Password for Postgres. Will be autogenerated if left empty.
  password:
  # -- (string) Will create a Database for the individual service to help with developing it.
  separate: false

# -- (map) Postgresql subchart settings if deployed separately option is set to "true".
# Disable persistence by default so we can spin up and down ephemeral environments
postgresql:
  primary:
    persistence:
      # -- (bool) Option to persist the dbs data.
      enabled: false

# -- (int) Number of desired replicas
replicaCount: 1

# -- (map) Docker image information.
image:
  # -- (string) The Docker image repository for the indexd service
  repository: quay.io/cdis/indexd
  # -- (string) When to pull the image.
  pullPolicy: IfNotPresent
  # -- (string) Overrides the image tag whose default is the chart appVersion.
  tag: ""

# -- (list) Docker image pull secrets.
imagePullSecrets: []

# -- (string) Override the name of the chart.
nameOverride: ""

# -- (string) Override the full name of the deployment.
fullnameOverride: ""

# -- (map) Service account to use or create.
serviceAccount:
  # -- (bool) Specifies whether a service account should be created.
  create: false
  # -- (map) Annotations to add to the service account.
  annotations: {}
  # If not set and create is true, a name is generated using the fullname template
  # -- (string) The name of the service account
  name: ""

# -- (map) Annotations to add to the pod
podAnnotations: {}

# -- (map) Security context for the pod
podSecurityContext:
  {}
  # fsGroup: 2000

# -- (map) Security context for the containers in the pod
securityContext:
  {}
  # capabilities:
  #   drop:
  #   - ALL
  # readOnlyRootFilesystem: true
  # runAsNonRoot: true
  # runAsUser: 1000

# -- (map) Kubernetes service information.
service:
  # -- (string) Type of service. Valid values are "ClusterIP", "NodePort", "LoadBalancer", "ExternalName".
  type: ClusterIP
  # -- (int) The port number that the service exposes.
  port: 80

# -- (map) Resource requests and limits for the containers in the pod
resources:
  # -- (map) The amount of resources that the container requests
  requests:
    # -- (string) The amount of CPU requested
    cpu: 0.1
    # -- (string) The amount of memory requested
    memory: 12Mi
  # -- (map) The maximum amount of resources that the container is allowed to use
  limits:
    # -- (string) The maximum amount of CPU the container can use
    cpu: 1.0
    # -- (string) The maximum amount of memory the container can use
    memory: 512Mi

# -- (map) Autoscaling options.
autoscaling:
  enabled: false
  # -- (int) Minimum number of replicas
  minReplicas: 1
  # -- (int) Maximum number of replicas
  maxReplicas: 100
  # -- (int) Target CPU utilization percentage
  targetCPUUtilizationPercentage: 80
  # targetMemoryUtilizationPercentage: 80

# -- (map) Node Selector for the pods
nodeSelector: {}

# -- (list) Tolerations for the pods
tolerations: []

# -- (map) Affinity to use for the deployment.
affinity: {}

# -- (list) Volumes to attach to the pod
volumes:
  - name: uwsgi-config
    configMap:
      name: indexd-uwsgi
  - name: config-volume
    secret:
      secretName: "indexd-settings"

# -- (list) Volumes to mount to the container.
volumeMounts:
  - name: "config-volume"
    readOnly: true
    mountPath: "/var/www/indexd/local_settings.py"
    subPath: "local_settings.py"

# -- (list) Environment variables to pass to the container
env:
  - name: "ARBORIST"
    value: "true"
  - name: "GEN3_DEBUG"
    value: "False"

# -- (map) Values for overriding uwsgi settings
uwsgi:
  listen: 1024

# -- (string) default prefix for indexd
defaultPrefix: "PREFIX/"

# Values to determine the labels that are used for the deployment, pod, etc.
# -- (string) Valid options are "production" or "dev". If invalid option is set- the value will default to "dev".
release: "production"
# -- (string) Valid options are "true" or "false". If invalid option is set- the value will default to "false".
criticalService: "true"
# -- (string) Label to help organize pods and their use. Any value is valid, but use "_" or "-" to divide words.
partOf: "S3-GS"
# -- (map) Will completely override the selectorLabels defined in the common chart's _label_setup.tpl
selectorLabels:
# -- (map) Will completely override the commonLabels defined in the common chart's _label_setup.tpl
commonLabels: