From 3f9b1d0824ebcde63705c746b624f9a3197bde13 Mon Sep 17 00:00:00 2001
From: Lennart Opitz <lennart.opitz@fgcz.ethz.ch>
Date: Mon, 24 Jun 2024 14:31:48 +0200
Subject: [PATCH] add minReadCount parameter

---
 master/lib/MergeRunDataApp.rb | 1 +
 1 file changed, 1 insertion(+)

diff --git a/master/lib/MergeRunDataApp.rb b/master/lib/MergeRunDataApp.rb
index f0451d3e0..1d0a08056 100644
--- a/master/lib/MergeRunDataApp.rb
+++ b/master/lib/MergeRunDataApp.rb
@@ -19,6 +19,7 @@ def initialize
     @params['SecondDataSet'] = ''
     @params['matchingColumn'] = ['Name', 'Tube', 'Sample Id']
     @params['Name'] = 'MergedRunData'
+    @params['minReadCount'] = 10000
     @required_columns = ['Name', 'Species', 'Read1']
     @required_params = ['SecondDataSet', 'paired']