ALL-EN

ALL-EN Function

To use ALL_EN function, the following scripts need to be available in the Matlab path:

   - rdir.m
   - balanced_crossval.m

• ALL-EN
  • Without Harmonization

  % OUTPUT          : 
  % Results         : 'results','results_NC','results_MCI','results_AD','cor','MAE','cor_s','CorNC','CorMCI','CorAD','MAE_NC','MAE_MCI','MAE_AD'
  % INPUT           :
  % Datapath        : The directory containing data
  % Harmonization   : 0- Without data monization, 1- ComBat harmonization, 2- PLS-based domain adaptation  
  % Covariate       : 0- Without considering Age as covariate, 1-With considering Age as covariate
  %--------------------------------------------------------------------------------------------------------------------------------------------
  %--------------------------------------------------------------------------------------------------------------------------------------------
  Datapath       = '/path/to/the/data/folder';
  Harmonization  = 0;
  Covariate      = 0;
  ALL_EN(Datapath,Harmonization,Covariate)
  

  • ComBat+ALL-EN

       Datapath       = '/path/to/the/data/folder';
       Harmonization  = 1;
       Covariate      = 0; Or 1
       ALL_EN(Datapath,Harmonization,Covariate)
    

  • PLS-Based Domain adaptation

        Datapath       = '/path/to/the/data/folder';
        Harmonization  = 2;
        Covariate      = 0; Or 1
        ALL_EN(Datapath,Harmonization)