wip

Author: holtgrewe

src/algos/phenomizer.rs

@@ -84,7 +84,7 @@ mod test {
 
         let score = score(&prepare(query), &hpo_marfan, &hpo);
 
-        assert!((score - 1.770_859_7).abs() < 0.00001, "score = {score}");
+        assert!((score - 1.757_194).abs() < 0.00001, "score = {score}");
 
         Ok(())
     }

src/server/run/hpo_genes.rs

@@ -216,7 +216,7 @@ pub(crate) mod test {
     pub fn web_server_data() -> Arc<crate::server::run::WebServerData> {
         let ontology = crate::common::load_hpo("tests/data/hpo").expect("could not load HPO");
         let ncbi_to_hgnc =
-            crate::common::hgnc_xlink::load_ncbi_to_hgnc("tests/data/hgnc_xlink.tsv")
+            crate::common::hgnc_xlink::load_ncbi_to_hgnc("tests/data/hpo/hgnc_xlink.tsv")
                 .expect("could not HGNC xlink");
         let hgnc_to_ncbi = crate::common::hgnc_xlink::inverse_hashmap(&ncbi_to_hgnc);
         let hpo_doc = fastobo::from_file("tests/data/hpo/hp.obo").expect("could not load HPO OBO");