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Update Changes for release 2.8
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Release 2.8
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- switched to disposable-irods 1.3 (iRODS packages from Sanger S3,
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replaced RENCI FTP site)
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- added single-server option
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- added support for data files to change during the tar process
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and to detect and archive those changes
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- individually check the checksum of files local to the gridionxi
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where they are loaded and compare with the iRODS checksum
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- updated the samtools and htslib versions to 1.7
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- added tar file auditor
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- use manifest checksums to confirm file contents
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- support loading PacBio RSII files created using out of date reagents
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- allow a user-supplied checksum to be used in TarPublisher and TarStream
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(so GridIONRunPublisher can allow the checksum of uncompressed data to be used)
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- publish fastq files during the catchup phase
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- allow auditing of older GridION tar files which used a relative path for tarred files
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- archiving changes for illumina sequencing genotype files
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- fix for the regex used when choosing to ignore files
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- minor fix to DataObjectFactory.pm
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Release 2.7
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- Moved quant file tests to illumina run publisher tests
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- Added compression extentions to illumina ancillary file regular expression

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