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Copy pathT136792_PRAD_cor.txt
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T136792_PRAD_cor.txt
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pathway pval padj ES NES nMoreExtreme size leadingEdge
HALLMARK_TNFA_SIGNALING_VIA_NFKB 0.0511363636363636 0.417613636363636 0.565860103587401 1.5708100702191 17 9 FOS|EGR3|TNFAIP8
HALLMARK_MTORC1_SIGNALING 0.0460122699386503 0.417613636363636 0.525458375439477 1.54505206473346 14 11 CALR|EDEM1|CCNG1|PDK1|SQLE|SKAP2|P4HA1
HALLMARK_ANDROGEN_RESPONSE 0.0963541666666667 0.462264150943396 0.729101741275742 1.5004101891934 36 4 UAP1|TNFAIP8|MAP7
HALLMARK_CHOLESTEROL_HOMEOSTASIS 0.101063829787234 0.462264150943396 0.66531546612248 1.49798530710893 37 5 PCYT2|ACAT2|ERRFI1|SQLE
HALLMARK_PI3K_AKT_MTOR_SIGNALING 0.0809399477806789 0.462264150943396 0.569980625098604 1.47118043325749 30 7 PRKAA2|CALR|PDK1
HALLMARK_UNFOLDED_PROTEIN_RESPONSE 0.0958083832335329 0.462264150943396 0.456110430753539 1.394726865457 31 12 ALDH18A1|CALR|EDEM1|GEMIN4|HERPUD1
HALLMARK_PROTEIN_SECRETION 0.169398907103825 0.515789473684211 0.478013551046354 1.28160946173697 61 8 GALC|LAMP2|TSPAN8
HALLMARK_P53_PATHWAY 0.124629080118694 0.506877957521734 0.381155888434436 1.28043739303593 41 15 FOS|WWP1|ANKRA2|HIST1H1C|CD82|CCNG1
HALLMARK_ESTROGEN_RESPONSE_LATE 0.191616766467066 0.515789473684211 0.399407314565573 1.2213360500533 63 12 FOS|FGFR3|EGR3|ISG20|DYNLT3
HALLMARK_SPERMATOGENESIS 0.251928020565553 0.537779653862389 0.484282880321812 1.17653869414737 97 6 PACRG|CLGN|MAP7|DBF4
HALLMARK_ESTROGEN_RESPONSE_EARLY 0.368263473053892 0.601497005988024 0.340875352101436 1.04235285863235 122 12 FOS|EGR3|PMAIP1
HALLMARK_APOPTOSIS 0.396866840731071 0.627305651478144 0.400589331751367 1.03396354313333 151 7 EGR3|PMAIP1|ISG20
HALLMARK_GLYCOLYSIS 0.498489425981873 0.763311933534743 0.299555516095302 0.972569574061533 164 14 CHPF|SOX9|ISG20|PC
HALLMARK_ANGIOGENESIS 0.598409542743539 0.81450187762315 0.697791164658635 0.930477546818577 300 1 MSX1
HALLMARK_KRAS_SIGNALING_DN 0.590909090909091 0.81450187762315 0.317737643834116 0.882029829383842 207 9 FGFR3|NUDT11
HALLMARK_INTERFERON_GAMMA_RESPONSE 0.712793733681462 0.850898203592814 0.313131313131313 0.808225123159788 272 7 ISG20|PSMA2|TRAFD1|VAMP8
HALLMARK_HYPOXIA 0.781437125748503 0.850898203592814 0.253369563659806 0.774771444585531 260 12 FOS|ISG20|PDK1|ERRFI1
HALLMARK_INTERFERON_ALPHA_RESPONSE 0.760925449871465 0.850898203592814 0.312815338042382 0.759967705414414 295 6 ISG20|TRAFD1
HALLMARK_NOTCH_SIGNALING 0.9296875 0.949055989583333 0.298086606243706 0.61342904007822 356 4 ARRB1|HES1|NOTCH2
HALLMARK_COMPLEMENT 0.953150242326333 0.953150242326333 -0.252956048913142 -0.5850386781543 589 7 PDGFB|FCER1G|COL4A2
HALLMARK_PEROXISOME 0.900489396411093 0.938808094130714 -0.301908603939333 -0.663040948924539 551 6 ERCC3|EPHX2|PEX5|GNPAT
HALLMARK_HEME_METABOLISM 0.846616541353384 0.901830663615561 -0.241061205895869 -0.698202084459678 562 15 FBXO34|MARK3
HALLMARK_KRAS_SIGNALING_UP 0.771428571428571 0.850898203592814 -0.2732046362791 -0.7642035047965 512 13 TMEM176B|TSPAN7
HALLMARK_ADIPOGENESIS 0.755588673621461 0.850898203592814 -0.269926975019643 -0.769481591930494 506 14 VEGFB|SNCG|SOWAHC|ACAA2|CD151|HIBCH
HALLMARK_ALLOGRAFT_REJECTION 0.716981132075472 0.850898203592814 -0.329454190340103 -0.799743293491161 455 8 CCL19|DARS|NPM1
HALLMARK_COAGULATION 0.752427184466019 0.850898203592814 -0.422316770043267 -0.805245735105382 464 4 PDGFB|CFI
HALLMARK_FATTY_ACID_METABOLISM 0.658054711246201 0.848544232922732 -0.329259965851292 -0.86072783047196 432 10 NCAPH2|IDH3B|ACAA2|HIBCH
HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY 0.63915857605178 0.846453249365871 -0.469463952841374 -0.895142870534126 394 4 STK25|NQO1
HALLMARK_MITOTIC_SPINDLE 0.571005917159763 0.81450187762315 -0.306151565774629 -0.917334552350243 385 17 KATNA1|PKD2|TIAM1
HALLMARK_WNT_BETA_CATENIN_SIGNALING 0.58 0.81450187762315 -0.70281124497992 -0.946730486727343 289 1 NOTCH1
HALLMARK_DNA_REPAIR 0.33532041728763 0.566575877485996 -0.389252496769422 -1.10964319462795 224 14 AK1|NCBP2|ERCC3|RFC5
HALLMARK_UV_RESPONSE_UP 0.333830104321908 0.566575877485996 -0.39004990363918 -1.11191636464926 223 14 BAK1|BID|RRAD|STK25|PLCL1|ATP6V1F|MRPL23|MARK2
HALLMARK_INFLAMMATORY_RESPONSE 0.330849478390462 0.566575877485996 -0.391421460277952 -1.11582626504268 221 14 PTGER2|CX3CL1|SPHK1|RNF144B|ADRM1|LPAR1|TPBG|C3AR1
HALLMARK_OXIDATIVE_PHOSPHORYLATION 0.312781954887218 0.566575877485996 -0.408359830275558 -1.14225738539767 207 13 ATP6V1E1|MRPL11|IDH3B|ATP6V1F|ACAA2|GPI|MRPL34|SDHC
HALLMARK_UV_RESPONSE_DN 0.284649776453055 0.557913561847988 -0.406930637671238 -1.16003832094873 190 14 RND3|EFEMP1|LTBP1|TJP1|SYNE1|VLDLR|SNAI2
HALLMARK_BILE_ACID_METABOLISM 0.273846153846154 0.557913561847988 -0.46651476097513 -1.17331208455139 177 9 PEX12|BBOX1|CYP27A1
HALLMARK_TGF_BETA_SIGNALING 0.252427184466019 0.537779653862389 -0.620090932190587 -1.18234845012864 155 4 TJP1|ENG|TGIF1
HALLMARK_HEDGEHOG_SIGNALING 0.237936772046589 0.537779653862389 -0.687767797152865 -1.19103111544362 142 3 CNTFR|VLDLR
HALLMARK_MYOGENESIS 0.232142857142857 0.537779653862389 -0.409251805775005 -1.21470228092062 155 16 AK1|FGF2|PDE4DIP|SPHK1|LAMA2|MYL2|SLN|COL4A2|NOTCH1|SORBS3|NQO1
HALLMARK_APICAL_JUNCTION 0.2 0.515789473684211 -0.446663228700649 -1.24939902003731 132 13 CDH3|CX3CL1|IKBKG|MSN|COL16A1|TJP1
HALLMARK_MYC_TARGETS_V2 0.174757281553398 0.515789473684211 -0.657603222557905 -1.25387440878101 107 4 MCM5|PUS1|NPM1|BYSL
HALLMARK_APICAL_SURFACE 0.166389351081531 0.515789473684211 -0.725461528938995 -1.25630664535403 99 3 CX3CL1
HALLMARK_XENOBIOTIC_METABOLISM 0.180473372781065 0.515789473684211 -0.471135582666567 -1.27471714873555 121 11 TMEM176B|PGD|LONP1|CYP27A1
HALLMARK_EPITHELIAL_MESENCHYMAL_TRANSITION 0.13447782546495 0.506877957521734 -0.41298263581494 -1.3246330447063 93 22 FGF2|COL16A1|ABI3BP|FSTL3|LAMA2|TNC|SNAI2|NT5E|LAMA3|DCN|COL4A2|VEGFC
HALLMARK_E2F_TARGETS 0.10377358490566 0.462264150943396 -0.568598414537141 -1.38026099545541 65 8 MCM3|ANP32E|MCM5|TCF19
HALLMARK_IL6_JAK_STAT3_SIGNALING 0.00998336106489185 0.326666666666667 -0.887995386933162 -1.53777210940384 5 3 BAK1|CNTFR
HALLMARK_G2M_CHECKPOINT 0.0315789473684211 0.386842105263158 -0.533130909280592 -1.54414357451769 20 15 MCM3|KATNA1|SNRPD1|MCM5|EWSR1|FOXN3
HALLMARK_IL2_STAT5_SIGNALING 0.02 0.326666666666667 -0.626747057946244 -1.57630574327006 12 9 DCPS|PTGER2|TIAM1|AHNAK|PUS1|NT5E
HALLMARK_MYC_TARGETS_V1 0.0148809523809524 0.326666666666667 -0.55939108145623 -1.66033139740159 9 16 NCBP2|SNRPD1|MCM5|PRPF31|EEF1B2|MRPL23|NPM1|PSMB3