Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Warwick #18

Open
wants to merge 7 commits into
base: master
Choose a base branch
from
Open

Warwick #18

wants to merge 7 commits into from

Commits on May 17, 2023

  1. Chunk long contigs before sending to Kraken

    @NigelDyer
    NigelDyer committed May 17, 2023
    Configuration menu
    Copy the full SHA
    da41beb View commit details
    Browse the repository at this point in the history

  2. Chunk long contigs before sending to Kraken

    @NigelDyer
    NigelDyer committed May 17, 2023
    Configuration menu
    Copy the full SHA
    650297d View commit details
    Browse the repository at this point in the history

Commits on Jul 26, 2023

  1. Move to more recent hapog version that deals with conflict with Pytho… 

    …n 'lib' library.
    @NigelDyer
    NigelDyer committed Jul 26, 2023
    Configuration menu
    Copy the full SHA
    fb95267 View commit details
    Browse the repository at this point in the history

Commits on Jul 29, 2023

  1. Bug with hapog installer

    @NigelDyer
    NigelDyer committed Jul 29, 2023
    Configuration menu
    Copy the full SHA
    989ef9e View commit details
    Browse the repository at this point in the history

Commits on Jul 31, 2023

  1. Move to later version of htslib to deal with crash when compiled with… 

    … older compilers. Dont have a backup pre-compiled hapog as this does not work as it relies on htslib so file being in the same location
    @NigelDyer
    NigelDyer committed Jul 31, 2023
    Configuration menu
    Copy the full SHA
    5142cf6 View commit details
    Browse the repository at this point in the history

Commits on Aug 1, 2023

  1. Ensure that there are no duplicate kmers

    @NigelDyer
    NigelDyer committed Aug 1, 2023
    Configuration menu
    Copy the full SHA
    8aa1681 View commit details
    Browse the repository at this point in the history

Commits on Aug 2, 2023

  1. Install from https URLs rather than ftp to avoid firewall problems

    @NigelDyer
    NigelDyer committed Aug 2, 2023
    Configuration menu
    Copy the full SHA
    c943ce5 View commit details
    Browse the repository at this point in the history