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Numpy 2 compatibility #30

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MartaRudzite opened this issue Jul 24, 2024 · 0 comments
Open

Numpy 2 compatibility #30

MartaRudzite opened this issue Jul 24, 2024 · 0 comments

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@MartaRudzite
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When testing a fresh installation (July 2024) of PEPPAN by running provided example genomes a following error is returned:
AttributeError: module 'numpy.lib.npyio' has no attribute 'format'

This appears to be due to incompatibility with the latest Numpy release - 2.0 and later.
Manually downgrading Numpy to 1.26.4 appears to solve the issue.
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@MartaRudzite