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DESCRIPTION
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DESCRIPTION
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Package: LTMGSCA
Type: Package
Title: An R package for Single Cell RNA-seq data analysis within the Left Truncated Mixture Gaussian scheme
Version: 0.1.0
Author: Chi Zhang, Yu Zhang
Maintainer: Yu Zhang <zy26@jlu.edu.cn>
Description: With an inference of the heterogeneous TRS of each gene by the LTMG model, analysis of following problems for a scRNA-seq data, including (1) differentially expressed genes, (2) transcriptional bursts, (3) cell type specific gene regulations, (4) cell type inference, and (5) gene co-regulation module identification, can be formulated and computed by implementing LTMG model with other methods.
An R package of LTMG model based single cell RNA-seq analysis tools.
Specifically, the package includes the fitting of LTMG and LTMG-2LR models for single cell RNA-seq data, LTMG-DEG, LTMG based likelihood assessment, outlier gene and cell identification, identification of phenotypic feature associated TRS, cell type inference, and gene co-regulation module identification.
License: What license is it under?
Encoding: UTF-8
LazyData: true