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Project for the course "Brain Modeling" (BAI, A.Y. 2024/25)

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Brain Modeling Project 2024/2025

Comparison of Cerebellar Spiking Neural Networks

This project investigates the differences between two spiking neural network (SNN) models of the cerebellum. Using the NEST simulator, we implement a biologically inspired Leaky Integrate-and-Fire (LIF) network and compare its dynamics with a more detailed model that incorporates spatial information. The simplest way to inspect the code and its functioning is through Colab: check below for the link.

Colab compatibility

If you want to open and run this project with colab, follow this link: Colab Link

Objectives

The goal of this project is to examine how different levels of abstraction in neural modeling influence network behavior. Specifically, we:

  1. Implement a Spiking Neural Network (SNN) in NEST:
    • Construct a network of excitatory and inhibitory LIF neurons.
    • Define synaptic connectivity and external inputs.
    • Analyze neural activity using spike trains, raster plots, and average firing rates.
  2. Compare Network Dynamics:
    • Measure firing rates across models.
    • Examine temporal patterns, including oscillations and fluctuations.
    • Compare some variables extracted from the results (e.g. Correlation coefficients)

Requirements

To set up the environment, it is recommended to use Conda and install dependencies from the requirements.txt file. Software & Libraries:

  • NEST Simulator for SNN simulations.

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Project for the course "Brain Modeling" (BAI, A.Y. 2024/25)

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