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attmept to fix the error thrown by qc report chunk name: set html_rep…
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…ort = FALSE
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3mmaRand committed Feb 5, 2024
1 parent 2d2d486 commit 63fc7a4
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10 changes: 10 additions & 0 deletions r4babs4/week-2/workshop.qmd
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Expand Up @@ -105,6 +105,7 @@ fs[[1]]
🎬 You can use the `exprs()` function to access the actual data and pipe it to `View()` to show it in a window:

```{r}
#|eval: false
exprs(fs[[1]]) |> View()
```

Expand Down Expand Up @@ -173,11 +174,20 @@ It generates a new flowSet with the problematic events removed along with a fold
🎬 Run the automated quality control:

```{r}
#|echo: false
fs_clean <- flow_auto_qc(fs,
html_report = FALSE,
folder_results = "sample-QC")
```


```{r}
#|eval: false
fs_clean <- flow_auto_qc(fs,
folder_results = "sample-QC")
```


❓ What has been removed through the QC process?

❓ What is in the folder "sample-QC"?
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