Faceted search tool to display the data from InterMine database, allowing the users to search easily within the different mines available around InterMine without the requirement of having an extensive knowledge of the data model.
You can access the demo in this link.
- Check out the latest deployed version
- Read the latest stable documentation docs
- Set up the project to contribute
| Filter | Ontology Concepts |
|---|---|
| GO Annotation | goAnnotation.ontologyTerm.name |
| Dataset Name | dataSets.name |
| Pathway Name | pathways.name |
| Organism short name | Gene.organism.shortName |
| Location | locations.start + locations.end + locations.locatedOn.primaryIdentifier |
| Diseases (OMIM) | diseases.name |
| ClinVar | alleles.clinicalSignificance + alleles.type |
| Protein Localisation | proteinAtlasExpression.cellType + proteinAtlasExpression.tissue.name + proteinAtlasExpression.expressionType + proteinAtlasExpression.level + proteinAtlasExpression.reliability |
| Protein Domain Name | proteins.proteinDomainRegions.proteinDomain.name |
| Interactions | interactions.participant2.symbol + interactions.details.type + interactions.details.dataSets.name |
| Expression | atlasExpression.pValue + atlasExpression.tStatistic + atlasExpression.expression + atlasExpression.dataSets.name |