Adding generic calibration class for acquisition #1000
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| name: CI | |
| on: | |
| pull_request: | |
| branches: | |
| - main | |
| jobs: | |
| linters: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: [ '3.11' ] | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v3 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install -e .[linters] --no-cache-dir | |
| - name: Run linters | |
| run: flake8 . && interrogate . && codespell src examples tests | |
| tests: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: [ '3.7', '3.8', '3.9', '3.10', '3.11' ] | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v3 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install dependencies | |
| run: | | |
| sudo apt-get install -y graphviz graphviz-dev | |
| python -m pip install -e .[dev] --no-cache-dir | |
| - name: Run tests and coverage | |
| run: coverage run -m unittest discover && coverage report | |
| schema_version_check: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: [ '3.11'] | |
| steps: | |
| - uses: actions/checkout@v3 | |
| with: | |
| ref: main | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v3 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install dependencies | |
| run: python -m pip install -e . --no-cache-dir | |
| - name: Build schemas from main branch | |
| run: | | |
| mkdir /tmp/main_schemas | |
| python -m aind_data_schema.utils.json_writer --output /tmp/main_schemas | |
| echo "Finished building main branch schemas" | |
| - uses: actions/checkout@v3 | |
| - name: Install dependencies | |
| run: python -m pip install -e . --no-cache-dir | |
| - name: Build current branch schemas | |
| run: | | |
| mkdir /tmp/branch_schemas | |
| python -m aind_data_schema.utils.json_writer --output /tmp/branch_schemas | |
| echo "Finished building current branch schemas" | |
| - name: Compare schema versions | |
| run: python -m aind_data_schema.utils.schema_version_check --old-schema-folder /tmp/main_schemas --new-schema-folder /tmp/branch_schemas |