add crop offset to example files to make tests pass

AllenNeuralDynamics · Aug 5, 2024 · 0aef481 · 0aef481
1 parent 1ea794f
commit 0aef481
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Showing 8 changed files with 47 additions and 5 deletions.
diff --git a/examples/aibs_smartspim_instrument.json b/examples/aibs_smartspim_instrument.json
@@ -98,6 +98,8 @@
          "bin_height": null,
          "bin_unit": "pixel",
          "gain": null,
+         "crop_offset_x": null,
+         "crop_offset_y": null,
          "crop_width": null,
          "crop_height": null,
          "crop_unit": "pixel",
@@ -506,4 +508,4 @@
    ],
    "daqs": [],
    "notes": null
-}
+}
diff --git a/examples/aind_smartspim_instrument.json b/examples/aind_smartspim_instrument.json
@@ -118,6 +118,8 @@
          "bin_height": null,
          "bin_unit": "pixel",
          "gain": null,
+         "crop_offset_x": null,
+         "crop_offset_y": null,
          "crop_width": null,
          "crop_height": null,
          "crop_unit": "pixel",
@@ -633,4 +635,4 @@
    ],
    "daqs": [],
    "notes": null
-}
+}
diff --git a/examples/ephys_rig.json b/examples/ephys_rig.json
@@ -64,6 +64,8 @@
             "bin_height": null,
             "bin_unit": "pixel",
             "gain": null,
+            "crop_offset_x": null,
+            "crop_offset_y": null,
             "crop_width": null,
             "crop_height": null,
             "crop_unit": "pixel",
@@ -171,6 +173,8 @@
             "bin_height": null,
             "bin_unit": "pixel",
             "gain": null,
+            "crop_offset_x": null,
+            "crop_offset_y": null,
             "crop_width": null,
             "crop_height": null,
             "crop_unit": "pixel",
@@ -354,6 +358,8 @@
             "bin_height": null,
             "bin_unit": "pixel",
             "gain": null,
+            "crop_offset_x": null,
+            "crop_offset_y": null,
             "crop_width": null,
             "crop_height": null,
             "crop_unit": "pixel",
@@ -430,6 +436,8 @@
             "bin_height": null,
             "bin_unit": "pixel",
             "gain": null,
+            "crop_offset_x": null,
+            "crop_offset_y": null,
             "crop_width": null,
             "crop_height": null,
             "crop_unit": "pixel",
@@ -506,6 +514,8 @@
             "bin_height": null,
             "bin_unit": "pixel",
             "gain": null,
+            "crop_offset_x": null,
+            "crop_offset_y": null,
             "crop_width": null,
             "crop_height": null,
             "crop_unit": "pixel",
@@ -582,6 +592,8 @@
             "bin_height": null,
             "bin_unit": "pixel",
             "gain": null,
+            "crop_offset_x": null,
+            "crop_offset_y": null,
             "crop_width": null,
             "crop_height": null,
             "crop_unit": "pixel",

diff --git a/examples/exaspim_instrument.json b/examples/exaspim_instrument.json
@@ -95,6 +95,8 @@
          "bin_height": null,
          "bin_unit": "pixel",
          "gain": null,
+         "crop_offset_x": null,
+         "crop_offset_y": null,
          "crop_width": null,
          "crop_height": null,
          "crop_unit": "pixel",
@@ -455,4 +457,4 @@
       }
    ],
    "notes": null
-}
+}
diff --git a/examples/fip_behavior_rig.json b/examples/fip_behavior_rig.json
@@ -138,6 +138,8 @@
             "bin_height": null,
             "bin_unit": "pixel",
             "gain": null,
+            "crop_offset_x": null,
+            "crop_offset_y": null,
             "crop_width": null,
             "crop_height": null,
             "crop_unit": "pixel",
@@ -213,6 +215,8 @@
             "bin_height": null,
             "bin_unit": "pixel",
             "gain": null,
+            "crop_offset_x": null,
+            "crop_offset_y": null,
             "crop_width": null,
             "crop_height": null,
             "crop_unit": "pixel",
@@ -390,6 +394,8 @@
          "bin_height": 4,
          "bin_unit": "pixel",
          "gain": "2",
+         "crop_offset_x": 0,
+         "crop_offset_y": 0,
          "crop_width": 200,
          "crop_height": 200,
          "crop_unit": "pixel",
@@ -434,6 +440,8 @@
          "bin_height": 4,
          "bin_unit": "pixel",
          "gain": "2",
+         "crop_offset_x": 0,
+         "crop_offset_y": 0,
          "crop_width": 200,
          "crop_height": 200,
          "crop_unit": "pixel",
@@ -937,4 +945,4 @@
       }
    ],
    "notes": null
-}
+}
diff --git a/examples/fip_behavior_rig.py b/examples/fip_behavior_rig.py
@@ -169,6 +169,8 @@
             bin_width=4,
             bin_height=4,
             bin_mode="Additive",
+            crop_offset_x=0,
+            crop_offset_y=0,
             crop_width=200,
             crop_height=200,
             gain=2,
@@ -187,6 +189,8 @@
             bin_width=4,
             bin_height=4,
             bin_mode="Additive",
+            crop_offset_x=0,
+            crop_offset_y=0,
             crop_width=200,
             crop_height=200,
             gain=2,

diff --git a/examples/fip_ophys_rig.json b/examples/fip_ophys_rig.json
@@ -124,6 +124,8 @@
             "bin_height": null,
             "bin_unit": "pixel",
             "gain": null,
+            "crop_offset_x": null,
+            "crop_offset_y": null,
             "crop_width": null,
             "crop_height": null,
             "crop_unit": "pixel",
@@ -199,6 +201,8 @@
             "bin_height": null,
             "bin_unit": "pixel",
             "gain": null,
+            "crop_offset_x": null,
+            "crop_offset_y": null,
             "crop_width": null,
             "crop_height": null,
             "crop_unit": "pixel",
@@ -376,6 +380,8 @@
          "bin_height": 4,
          "bin_unit": "pixel",
          "gain": "2",
+         "crop_offset_x": 0,
+         "crop_offset_y": 0,
          "crop_width": 200,
          "crop_height": 200,
          "crop_unit": "pixel",
@@ -420,6 +426,8 @@
          "bin_height": 4,
          "bin_unit": "pixel",
          "gain": "2",
+         "crop_offset_x": 0,
+         "crop_offset_y": 0,
          "crop_width": 200,
          "crop_height": 200,
          "crop_unit": "pixel",
@@ -891,4 +899,4 @@
       }
    ],
    "notes": null
-}
+}
diff --git a/examples/fip_ophys_rig.py b/examples/fip_ophys_rig.py
@@ -115,6 +115,8 @@
             bin_width=4,
             bin_height=4,
             bin_mode="Additive",
+            crop_offset_x=0,
+            crop_offset_y=0,
             crop_width=200,
             crop_height=200,
             gain=2,
@@ -133,6 +135,8 @@
             bin_width=4,
             bin_height=4,
             bin_mode="Additive",
+            crop_offset_x=0,
+            crop_offset_y=0,
             crop_width=200,
             crop_height=200,
             gain=2,