added filegraph as artifact

AndrewRadev · Dec 5, 2024 · bbe4024 · bbe4024
1 parent 4041e12
commit bbe4024
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Showing 2 changed files with 12 additions and 4 deletions.
diff --git a/.github/workflows/snakemake.yml b/.github/workflows/snakemake.yml
@@ -23,14 +23,22 @@ jobs:
         run: |
           micromamba run -n protein-runway pip install -r requirements.txt
 
-      - name: Generate workflow image artifact
+      - name: Generate dag image artifact
         run: |
           micromamba run -n protein-runway snakemake --dag 03_output/5vde_example.segmentation.tsv | micromamba run -n protein-runway dot -Tsvg > dag.svg
       - uses: actions/upload-artifact@v4
         with:
-            name: dependency-graph
+            name: dag-image
             path: dag.svg
 
+      - name: Generate filegraph image artifact
+        run: |
+          micromamba run -n protein-runway snakemake --filegraph 03_output/5vde_example.segmentation.tsv | micromamba run -n protein-runway dot -Tsvg > dag.svg
+      - uses: actions/upload-artifact@v4
+        with:
+            name: filegraph-image
+            path: filegraph.svg
+
       - name: Run snakemake
         run: |
           micromamba run -n protein-runway snakemake

diff --git a/.gitignore b/.gitignore
@@ -25,6 +25,6 @@ vendor/*
 blender/extension.zip
 blender/extension/wheels/*
 
-# DAG workflow
+# Artifact workflow
 dag.svg
-
+filegraph.svg