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AUT-866 #53

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AUT-866 #53

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@vaitkusd vaitkusd commented Aug 2, 2021

feat: Full atom mapping module added, including main functions, example notebook, and unit tests.

vaitkusd added 4 commits July 27, 2021 23:37
Full atom mapping module added, including main functions, example notebook, and unit tests.

feat: INCA_input_parser() now returns metabolite annotations.
Added platform and subprocess modules to help correctly run different shell commands in all OS's
Sorted os.listdir output alphabetically to standardize file reading order
@mmattano mmattano self-requested a review August 3, 2021 14:45
Changed assertEqual to assertAlmostEqual in test_reshape_fluxes_escher()
New method added to compare whether two dictionaries are almost equal
Issue: Different OS's generate -0 instead of 0 in some molecule coordinates.

Solution: converted all numeric values in lists to floats instead of strings, and used new method to assertAlmostEqual on lists.
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