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Updated Readme and Changelog.
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rfm-targa committed Jul 2, 2024
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6 changes: 4 additions & 2 deletions CHANGELOG.md
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# Changelog

## 3.3.8 - 2024-07-01
## 3.3.8 - 2024-07-02

- Added support for genetic codes 2, 3, 5, 6, 9, 10, 12-16, 21-25 (full list available [here](https://www.ncbi.nlm.nih.gov/Taxonomy/Utils/wprintgc.cgi)). The CreateSchema and AlleleCall modules will use the genetic code used to create the training file (values passed to --t, --translation-table are ignored if a training file is used).
- Added support for genetic codes 2, 3, 5, 6, 9, 10, 12-16, 21-25 (full list available [here](https://www.ncbi.nlm.nih.gov/Taxonomy/Utils/wprintgc.cgi)). Values passed to --t, --translation-table are ignored if a training file is used. The CreateSchema and AlleleCall modules use the genetic code used to create the training file.

- Fixed issue related to data about CDSs close to the contig tips not being available if input FASTA files contain CDSs and `--cds` is used.

- Fixed issue in the AlleleCallEvaluator module related to fully numeric columns.

## 3.3.7 - 2024-06-27

- Fixed issue in the PrepExternalSchema module related to the adaptation of small loci (BLASTp would not report the self-alignment).
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6 changes: 4 additions & 2 deletions README.md
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## News

## 3.3.8 - 2024-07-01
## 3.3.8 - 2024-07-02

- Added support for genetic codes 2, 3, 5, 6, 9, 10, 12-16, 21-25 (full list available [here](https://www.ncbi.nlm.nih.gov/Taxonomy/Utils/wprintgc.cgi)). The CreateSchema and AlleleCall modules will use the genetic code used to create the training file (values passed to --t, --translation-table are ignored if a training file is used).
- Added support for genetic codes 2, 3, 5, 6, 9, 10, 12-16, 21-25 (full list available [here](https://www.ncbi.nlm.nih.gov/Taxonomy/Utils/wprintgc.cgi)). Values passed to --t, --translation-table are ignored if a training file is used. The CreateSchema and AlleleCall modules use the genetic code used to create the training file.

- Fixed issue related to data about CDSs close to the contig tips not being available if input FASTA files contain CDSs and `--cds` is used.

- Fixed issue in the AlleleCallEvaluator module related to fully numeric columns.

Check our [Changelog](https://github.com/B-UMMI/chewBBACA/blob/master/CHANGELOG.md) to learn about the latest changes.

## Citation
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