Segfault solved on cluster

.gitignore

@@ -39,7 +39,7 @@
 data/RAW_PRIORS/community_dictionary_withtrialarm.csv
 data/GENERATED_PRIORS/
 data/SAMPLED_PARAMETERS/
-
+generate_network/
 # eclipse related
 /Debug/
 .cproject

src/Makefile

@@ -36,10 +36,10 @@ endif
 
 # For compilation on Rescomp
 ifeq ($(location),rescomp)
-	INC = /apps/well/gsl/2.2.1-gcc4.9.3/include
-	LIB = /apps/well//gsl/2.2.1-gcc4.9.3/lib
+	INC = $EBROOTGSL/include
+	LIB = $EBROOTGSL/lib	
 else
-        INC = /usr/local/include
+	INC = /usr/local/include
 	LIB = /usr/local/lib
 endif
 

src/constants.h

@@ -91,10 +91,10 @@
 #define WRITE_ART_STATUS_BY_AGE_SEX 0 // Write totals of individuals in each ART_status stratified by sex and year of age.  Write these for each time step.
 #define WRITE_DEBUG_CHIPS_STATES 0                /* Generates the files CHIPS_outputs_annual*.csv containing the annual data on people when they are visited by CHiPs. */
 
-#define WRITE_CALIBRATION 1 /* Write Calibration*.csv files to disk */
+#define WRITE_CALIBRATION 0 /* Write Calibration*.csv files to disk */
 #define PRINT_ALL_RUNS 1 /* Use this if you want to print everything regardless of fitting. */
 #define PRINT_EACH_RUN_OUTPUT 1 /* 0 if don't want to generate an output file for every run (when calibrating at present this is the case), or 1 if we do. */
-#define WRITE_EVERYTIMESTEP 1 /* Generates the files Timestep_outputs*.csv */
+#define WRITE_EVERYTIMESTEP 0 /* Generates the files Timestep_outputs*.csv */
 #define TIMESTEP_AGE 0 /* Generates the files Timestep_age_outputs_*.csv */
 #define WRITE_PHYLOGENETICS_OUTPUT 0 // 1    /* if 1 print phylo output to file, otherwise do not print */
 #define WRITE_PARTNERSHIP_NETWORK_SNAPSHOT 0 /* if 1 then print out the sexual network at fixed times to allow network plots.  Writes the files Partnership_network_*.csv to disk.  The years at which partnerships are output are hard-coded in main.c */