Merge Template update for nf-core/tools version 2.11.1 #135

Job	Run time
Run pipeline with test data (23.04.0)	36s
Test Nanopore workflow (--gff false)	33s
Test workflow parameters (--consensus_caller ivar)	32s
Run pipeline with test data (latest-everything)	34s
Test workflow parameters (--variant_caller bcftools --consensus_caller ivar)	38s
Test Nanopore workflow (--input false)	28s
Test workflow parameters (--skip_fastp --skip_pangolin)	32s
Test SISPA workflow (--gff false)	1m 13s
Test Nanopore workflow (--min_barcode_reads 10000)	30s
Test workflow parameters (--skip_variants)	30s
Test SISPA workflow (--genome 'NC_045512.2')	1m 16s
Test Nanopore workflow (--min_guppyplex_reads 10000)	24s
Test workflow parameters (--skip_cutadapt --skip_snpeff)	32s
Test Nanopore workflow (--artic_minion_caller medaka --sequencing_summary false --fast5_dir false)	32s
Test workflow parameters (--skip_kraken2)	27s
Test Nanopore workflow (--artic_minion_caller medaka --sequencing_summary false --fast5_dir false...	24s
Test workflow parameters (--skip_assembly)	44s
Test workflow parameters (--spades_mode corona)	27s
Test workflow parameters (--spades_mode metaviral)	28s
Test workflow parameters (--skip_plasmidid false --skip_asciigenome)	32s
	11m 52s

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