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Removed TODO comment
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svarona committed Jan 16, 2024
1 parent b3d2dbb commit 249146a
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3 changes: 0 additions & 3 deletions main.nf
Original file line number Diff line number Diff line change
Expand Up @@ -28,9 +28,6 @@ if (params.platform == 'illumina' && params.protocol == 'amplicon') {
params.artic_scheme = WorkflowMain.getGenomeAttribute(params, 'scheme', log, primer_set, primer_set_version)
}

// TODO nf-core: Remove this line if you don't need a FASTA file
// This is an example of how to use getGenomeAttribute() to fetch parameters
// from igenomes.config using `--genome`
params.fasta = WorkflowMain.getGenomeAttribute(params, 'fasta' , log, primer_set, primer_set_version)
params.gff = WorkflowMain.getGenomeAttribute(params, 'gff' , log, primer_set, primer_set_version)
params.bowtie2_index = WorkflowMain.getGenomeAttribute(params, 'bowtie2' , log, primer_set, primer_set_version)
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