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added description for additional_variants_long_table
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svarona committed Oct 23, 2023
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Expand Up @@ -289,6 +289,7 @@ As described in the documentation, [ASCIIGenome](https://asciigenome.readthedocs

- `<CALLER>/`
- `variants_long_table.csv`: Long format table collating per-sample information for individual variants, functional effect prediction and lineage analysis.
- `additional_variants_long_table.csv`: Long format table similar to `variants_long_table.csv` for additional annotation file with overlapping annotation features.

**NB:** The value of `<CALLER>` in the output directory name above is determined by the `--artic_minion_caller` parameter (Default: 'nanopolish').

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