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  1. BgeeDB_R Public

    Source code of the R packge BgeeDB to use data from the Bgee database

    R 15 6

  2. BgeeCall Public

    Source code of the BgeeCall R package, for automatic RNA-Seq present/absent gene expression calls generation

    R 3 1

  3. bgee_pipeline Public

    Source code of the Bgee pipeline used to build the Bgee database

    Perl 11 3

  4. confidence-information-ontology Public

    Repository of the Confidence Information Ontology (CIO)

    Perl 5 3

  5. anatomical-similarity-annotations Public

    Project hosting resources used for annotating relations of similarity between anatomical structures

    Makefile 2 2

  6. homology-ontology Public

    Home for the ontology of homology and related concepts in biology

    Makefile 1

Repositories

Showing 10 of 16 repositories
  • bgee_pipeline Public

    Source code of the Bgee pipeline used to build the Bgee database

    Perl 11 CC0-1.0 3 12 1 Updated Mar 4, 2025
  • bgee_web Public

    React code of the Bgee frontend

    JavaScript 1 CC0-1.0 5 0 0 Updated Mar 3, 2025
  • bgee_apps Public

    Source code of the Java Bgee applications

    Java 2 CC0-1.0 1 98 1 Updated Feb 26, 2025
  • BgeeCall Public

    Source code of the BgeeCall R package, for automatic RNA-Seq present/absent gene expression calls generation

    R 3 GPL-3.0 1 1 0 Updated Feb 14, 2025
  • Biodiversity-Bioinformatics Public

    Biodiversity Bioinformatics

    R 0 0 0 0 Updated Feb 12, 2025
  • BgeeDB_R Public

    Source code of the R packge BgeeDB to use data from the Bgee database

    R 15 GPL-3.0 6 18 1 Updated Feb 3, 2025
  • bgee Public

    Project hosting resources used for developing Bgee.

    1 GPL-3.0 0 0 0 Updated Feb 3, 2025
  • anatomical-similarity-annotations Public

    Project hosting resources used for annotating relations of similarity between anatomical structures

    Makefile 2 CC0-1.0 2 21 0 Updated Feb 3, 2025
  • expression-annotations-documents Public

    Bgee Expression Annotations documentation

    Jupyter Notebook 1 1 0 0 Updated Feb 3, 2025
  • Wikidata_BgeeDB-bot Public

    The BgeeDB Wikidata bot

    Python 1 CC0-1.0 0 0 0 Updated Feb 3, 2025

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