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PDF vignette from R Markdown #1

PDF vignette from R Markdown

PDF vignette from R Markdown #1

Manually triggered September 14, 2023 12:13
Status Failure
Total duration 5m 31s
Artifacts 5

test-pandoc-versions.yml

on: workflow_dispatch
Matrix: create-vignette
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2 errors and 34 warnings
Pandoc: default, TinyTex:
LaTeX failed to compile AuthoringRmdVignettes.tex. See https://yihui.org/tinytex/r/#debugging for debugging tips. See AuthoringRmdVignettes.log for more info.
Pandoc: default, TinyTex:
Process completed with exit code 1.
Pandoc: 2.17, TinyTex: 2022.01
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Pandoc: 2.17, TinyTex: 2022.01
LaTeX Warning: You have requested package `/home/runner/work/_temp/Library/BiocStyle/resources/tex/Bioconductor',
Pandoc: 2.17, TinyTex: 2022.01
but the package provides `Bioconductor'.
Pandoc: 2.17, TinyTex: 2022.01
LaTeX Warning: Reference `non-existing-label' on page 10 undefined on input line 607.
Pandoc: 2.17, TinyTex: 2022.01
LaTeX Warning: There were undefined references.
Pandoc: 2.14, TinyTex: 2021.05
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Pandoc: 2.14, TinyTex: 2021.05
LaTeX Warning: You have requested package `/home/runner/work/_temp/Library/Bioc
Pandoc: 2.14, TinyTex: 2021.05
Style/resources/tex/Bioconductor',
Pandoc: 2.14, TinyTex: 2021.05
but the package provides `Bioconductor'.
Pandoc: 2.14, TinyTex: 2021.05
LaTeX Warning: Reference `non-existing-label' on page 10 undefined on input lin
Pandoc: 2.14, TinyTex: 2021.05
e 607.
Pandoc: 2.14, TinyTex: 2021.05
LaTeX Warning: There were undefined references.
Pandoc: default, TinyTex:
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Pandoc: 2.10, TinyTex: 2020.10
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Pandoc: 2.10, TinyTex: 2020.10
LaTeX Warning: You have requested package `/home/runner/work/_temp/Library/Bioc
Pandoc: 2.10, TinyTex: 2020.10
Style/resources/tex/Bioconductor',
Pandoc: 2.10, TinyTex: 2020.10
but the package provides `Bioconductor'.
Pandoc: 2.10, TinyTex: 2020.10
LaTeX Warning: Reference `non-existing-label' on page 10 undefined on input lin
Pandoc: 2.10, TinyTex: 2020.10
e 608.
Pandoc: 2.10, TinyTex: 2020.10
LaTeX Warning: There were undefined references.
Pandoc: 2.12, TinyTex: 2021.03
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Pandoc: 2.12, TinyTex: 2021.03
LaTeX Warning: You have requested package `/home/runner/work/_temp/Library/Bioc
Pandoc: 2.12, TinyTex: 2021.03
Style/resources/tex/Bioconductor',
Pandoc: 2.12, TinyTex: 2021.03
but the package provides `Bioconductor'.
Pandoc: 2.12, TinyTex: 2021.03
LaTeX Warning: Reference `non-existing-label' on page 10 undefined on input lin
Pandoc: 2.12, TinyTex: 2021.03
e 607.
Pandoc: 2.12, TinyTex: 2021.03
LaTeX Warning: There were undefined references.
Pandoc: 2.8, TinyTex: 2020.10
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Pandoc: 2.8, TinyTex: 2020.10
LaTeX Warning: You have requested package `/home/runner/work/_temp/Library/Bioc
Pandoc: 2.8, TinyTex: 2020.10
Style/resources/tex/Bioconductor',
Pandoc: 2.8, TinyTex: 2020.10
but the package provides `Bioconductor'.
Pandoc: 2.8, TinyTex: 2020.10
LaTeX Warning: Reference `non-existing-label' on page 10 undefined on input lin
Pandoc: 2.8, TinyTex: 2020.10
e 608.
Pandoc: 2.8, TinyTex: 2020.10
LaTeX Warning: There were undefined references.

Artifacts

Produced during runtime
Name Size
pandoc-v2.10-vignette Expired
283 KB
pandoc-v2.12-vignette Expired
283 KB
pandoc-v2.14-vignette Expired
235 KB
pandoc-v2.17-vignette Expired
247 KB
pandoc-v2.8-vignette Expired
283 KB