modernize to pyproject.toml

pyproject.toml

@@ -1,6 +1,64 @@
 [build-system]
 requires = [
-    "setuptools>=42",
-    "wheel",
+    "setuptools>=64",
+    "setuptools_scm>=8"
 ]
 build-backend = "setuptools.build_meta"
+
+[project]
+name = "neurom"
+description = "NeuroM: a light-weight neuron morphology analysis package"
+readme = "README.rst"
+requires-python = ">=3.8"
+license = { file = "LICENSE.txt" }
+authors = [
+    { name = "Blue Brain Project, EPFL" },
+]
+classifiers = [
+    "Development Status :: 6 - Mature",
+    "Intended Audience :: Education",
+    "Intended Audience :: Science/Research",
+    "Programming Language :: Python",
+    "Programming Language :: Python :: 3.8",
+    "Programming Language :: Python :: 3.9",
+    "Programming Language :: Python :: 3.10",
+    "Programming Language :: Python :: 3.11",
+    "Programming Language :: Python :: 3.12",
+    "Topic :: Scientific/Engineering :: Bio-Informatics",
+]
+dependencies = [
+    'click>=7.0',
+    'matplotlib>=3.2.1',
+    'morphio>=3.3.6',
+    'numpy>=1.8.0',
+    'pandas>=1.0.5',
+    'pyyaml>=3.10',
+    'scipy>=1.2.0',
+    'tqdm>=4.8.4',
+]
+dynamic = ["version"]
+
+[project.optional-dependencies]
+plotly = [
+    'plotly>=3.6.0',
+    'psutil>=5.5.1'
+]
+docs = [
+    'sphinx-bluebrain-theme',
+    'sphinx-autorun',
+]
+
+[project.urls]
+Homepage = "https://github.com/BlueBrain/NeuroM"
+Repository = "https://github.com/BlueBrain/NeuroM.git"
+Documentation = "https://neurom.readthedocs.io/"
+Tracker = "https://github.com/BlueBrain/NeuroM/issues"
+
+[project.scripts]
+neurom = 'neurom.apps.cli:cli'
+
+[tool.setuptools.packages.find]
+include = ["neurom"]
+
+[tool.setuptools_scm]
+local_scheme = "no-local-version"

setup.py

@@ -1,77 +1,3 @@
-# Copyright (c) 2015, Ecole Polytechnique Federale de Lausanne, Blue Brain Project
-# All rights reserved.
-#
-# This file is part of NeuroM <https://github.com/BlueBrain/NeuroM>
-#
-# Redistribution and use in source and binary forms, with or without
-# modification, are permitted provided that the following conditions are met:
-#
-#     1. Redistributions of source code must retain the above copyright
-#        notice, this list of conditions and the following disclaimer.
-#     2. Redistributions in binary form must reproduce the above copyright
-#        notice, this list of conditions and the following disclaimer in the
-#        documentation and/or other materials provided with the distribution.
-#     3. Neither the name of the copyright holder nor the names of
-#        its contributors may be used to endorse or promote products
-#        derived from this software without specific prior written permission.
-#
-# THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND
-# ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED
-# WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
-# DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE FOR ANY
-# DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES
-# (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES;
-# LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND
-# ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
-# (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
-# SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+from setuptools import setup
 
-""" Distribution configuration for neurom
-"""
-# pylint: disable=R0801
-from setuptools import find_packages, setup
-
-
-setup(
-    description='NeuroM: a light-weight neuron morphology analysis package',
-    author='Blue Brain Project, EPFL',
-    url='https://github.com/BlueBrain/NeuroM',
-    install_requires=[
-        'click>=7.0',
-        'matplotlib>=3.2.1',
-        'morphio>=3.3.6',
-        'numpy>=1.8.0',
-        'pandas>=1.0.5',
-        'pyyaml>=3.10',
-        'scipy>=1.2.0',
-        'tqdm>=4.8.4',
-    ],
-    packages=find_packages(exclude=('tests',)),
-    license='BSD',
-    entry_points={
-        'console_scripts': ['neurom=neurom.apps.cli:cli']
-    },
-    name='neurom',
-    extras_require={
-        'plotly': ['plotly>=3.6.0', 'psutil>=5.5.1'],  # for plotly image saving
-        'docs': [
-            'sphinx-bluebrain-theme',
-            'sphinx-autorun',
-        ],
-    },
-    include_package_data=True,
-    python_requires='>=3.8',
-    classifiers=[
-        'Development Status :: 6 - Mature',
-        'Intended Audience :: Education',
-        'Intended Audience :: Science/Research',
-        'Programming Language :: Python',
-        'Programming Language :: Python :: 3.8',
-        'Programming Language :: Python :: 3.9',
-        'Programming Language :: Python :: 3.10',
-        'Programming Language :: Python :: 3.11',
-        'Topic :: Scientific/Engineering :: Bio-Informatics',
-    ],
-    use_scm_version={"local_scheme": "no-local-version"},
-    setup_requires=['setuptools_scm'],
-)
+setup()