Python bindings for index writer #57
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| name: Run tests | |
| on: | |
| push: | |
| branches: ['main'] | |
| pull_request: | |
| jobs: | |
| build_w_submodules: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| submodules: true | |
| - name: Set up Apache Arrow repositories | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install -y ca-certificates lsb-release wget | |
| wget https://apache.jfrog.io/artifactory/arrow/$(lsb_release --id --short | tr 'A-Z' 'a-z')/apache-arrow-apt-source-latest-$(lsb_release --codename --short).deb | |
| sudo apt-get install -y ./apache-arrow-apt-source-latest-$(lsb_release --codename --short).deb | |
| sudo apt-get update | |
| - name: Install build dependencies | |
| run: | | |
| sudo apt-get install -y cmake g++ libhdf5-openmpi-dev librange-v3-dev ninja-build nlohmann-json3-dev | |
| sudo apt-get install -y libarrow-dev libparquet-dev | |
| sudo apt-get install -y python3 python3-dev python3-pip | |
| sudo apt-get install -y openmpi-bin libopenmpi-dev | |
| pip3 install nanobind mpi4py h5py | |
| - name: Configure and build | |
| run: | | |
| cmake -B build -S . -GNinja \ | |
| -DCMAKE_INSTALL_PREFIX=$PWD/install \ | |
| -DCMAKE_CXX_COMPILER=$(which mpicxx) | |
| cmake --build build | |
| ctest --test-dir build --output-on-failure | |
| cmake --install build | |
| - name: Set up Python | |
| uses: actions/setup-python@v5 | |
| - name: Small integration test (excluding MPI test) | |
| run: | | |
| export PATH=$PATH:$PWD/install/bin | |
| export PYTHONPATH=$PYTHONPATH:$PWD/build | |
| python -mpip install -r tests/test_requirements.txt | |
| python -mpytest tests -k "not test_indexing" | |
| - name: Run MPI test | |
| run: PYTHONPATH=$PYTHONPATH:$PWD/build PATH=$PATH:$PWD/install/bin mpirun -n 2 --oversubscribe python -mpytest tests/test_indexing.py | |
| build_docker_no_submodules: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - name: Set up QEMU | |
| uses: docker/setup-qemu-action@v3 | |
| - name: Set up Docker Buildx | |
| uses: docker/setup-buildx-action@v3 | |
| - name: Build | |
| uses: docker/build-push-action@v5 |