fixing testthat errors again

Move default assay call for quiet
BorchLab · Oct 31, 2024 · 470a331 · 470a331
1 parent aff12d3
commit 470a331
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Showing 3 changed files with 1 addition and 1 deletion.
diff --git a/tests/testthat/test-quietTCRgenes.R b/tests/testthat/test-quietTCRgenes.R
@@ -3,6 +3,7 @@
 test_that("quietTCRgenes works", {
 
   data("trex_example")
+  SeuratObject::DefaultAssay(trex_example) <- "RNA"
 
   features <- rownames(trex_example@assays$RNA$counts)
 
@@ -12,7 +13,6 @@ test_that("quietTCRgenes works", {
   )
 
   Seurat::VariableFeatures(trex_example) <- features
-  Seurat::DefaultAssay(trex_example) <- "RNA"
 
   trex_example <- quietTCRgenes(trex_example)
 

diff --git a/tests/testthat/testdata/CoNGAfy/CoNGAfy_ADT_counts.rds b/tests/testthat/testdata/CoNGAfy/CoNGAfy_ADT_counts.rds
diff --git a/tests/testthat/testdata/CoNGAfy/CoNGAfy_SCE_counts.rds b/tests/testthat/testdata/CoNGAfy/CoNGAfy_SCE_counts.rds