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ICDC 4.1.0

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@kuffelgr kuffelgr released this 18 Oct 16:44
v4.1.0.361
98cd1fc
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Release Notes - Integrated Canine Data Commons (ICDC) - Version 4.1.0 🐶 🧬

Build Details

FE Version: 4.1.0.361
BE Version: 14.8.1.171
FS Version: 2.3.1.83
Interop Version: 1.0.0.122

New Supported Features

  • Clear selected facet values within a facet
  • Expandable sample profile histograms with interactive sample distributions and legends
  • Ability to copy the URL related to a query from the Explore Dashboard page
  • Display abbreviated Dynamic Query Bar (DQB) URL
  • Display success message when a query URL is copied
  • Buttons in Local Find modal are disabled if no cases are entered or selected
  • Local Find modal tooltip is updated to specify valid file types
  • The Faceted Search menu on the Explore Dashboard page returns to default state upon clearing the Dynamic Query Bar (DQB)
  • Clearing a facet restores default collapsed state of faceted categories within the Explore Dashboard page
  • Ability to export or download a file manifest for all or only selected files
  • Display a node traceback to the root node within the Data Model Navigator (DMN) when any given node is selected
  • Display informative tooltips within the "My Files" Cart page for navigation

Tasks

  • Update the "Cases" icon used in the statistics bar
  • Implement updated design for the Supporting Data tab
  • Implement updated design for the Clinical Data tab
  • Bundle web fonts with ICDC application
  • Replace the plural form of CASE IDS in Dynamic Query Bar (DQB)
  • Achieve 508 compliance of the Dynamic Query Bar (DQB)
  • Update Opensearch configuration for Global Search
  • Fix downloaded CSV file for Adverse Event Node
  • Refactor Button on "My Files" Cart page
  • Improve FE display within the Supporting Data tab of the Study Details page
  • Implement ascending sort order for each category of Global Search results
  • Apply new design to navigation bar
  • Update link name for ICDC Tutorial Website
  • Update GraphiQL to the latest version
  • Implement new design for Programs page
  • Implement new design for Program Details page
  • Implement new design for the "My Files" Cart page
  • Upgrade version of Node on the FE
  • Revise data properties and values displayed within Arms & Cohorts tab of the Study Details page
  • Address 508 Compliance Scan for Design Elements on the Home page.
  • Address 508 Compliance Scan for Design Elements on the Explore page
  • Address 508 Compliance Scan for Design Elements on the Programs page
  • Address 508 Compliance Scan for Design Elements on the Program Details page
  • Address 508 Compliance Scan for Design Elements on the Studies page
  • Address 508 Compliance Scan for Design Elements on the Study Details page
  • Address 508 Compliance Scan for Design Elements on the File Centric Cart page
  • Address 508 Compliance Scan for Design Elements on the Static pages
  • Update manifest creation with new BE query
  • Remove comments from the FE File Manifest

New Content

  • New System Info page to inspect microservices
  • New page for ICDC Working Groups

New services

None

Integrations

Data Model

  • None

Contributions to the Bento Framework

  • Contribute new Dynamic Query Bar (DQB) feature back to Bento

Bug Fixes

  • Extra whitespace within the downloadable File Manifest at EOL
  • UI Styling discrepancy in Cases Tab on Dashboard
  • UI Styling issue in Studies and Programs widget
  • Files count mismatch between DB and UI for Biobank facet
  • Text obstructed in the 'Upload Case Set' window
  • "Multi-study Participant" title is cut off via Case Details view
  • Incorrect label of Program category of Global Search feature
  • Query strings are split across 2 lines in the Dynamic Query Bar (DQB)
  • When navigating to System Info Page - focus not at the top of the page
  • "sort by counts" and "sort by alphabet" move to the different lines when zoom out.
  • Data in Supporting Data tab of Study Details page not per design specs
  • Clinical Data download does not contain data for Adverse Event data
  • Extra characters in the tooltip of csv download button
  • "File Type" widget disappears when enter the case ID that does not have any files associated
  • Clicking outside of the "Copy URL" modal does not close the modal
  • Clinical Data - Adverse Event - download CSV file - Columns are out of order.
  • Clinical Data - Adverse Event - download CSV file - Data values have been transposed across columns.
  • Clinical Data - Adverse Event - download CSV file - The data export contains no identifiers.
  • Clinical Data - Adverse Event - download CSV file - unexpected column title
  • Clinical Data tab - incorrect column name
  • Clinical Data tab - missing tooltip above column headers
  • Clinical Data tab - Sort button on CSV column not working correctly
  • Clinical Data tab - download CSV files - unexpected data
  • Faceted Search menu does not return to default state upon clearing on the query term
  • Clinical Data - Prior Surgery - download csv file - Data values have been transposed across columns.
  • Content on the Studies page is upside-down
  • DMN: Node modal does not close when clicking on another node icon
  • The DMN node modals close by clicking on the node icon
  • BE version in the footer is different from BE version in the System Page
  • Versions of BE and FS are displayed incorrectly
  • The number of cases for Prior Surgery for COTC007B is not correct
  • System Info Page is not reachable
  • Global Search Results page disappears
  • Discrepancies in the design for column name "Canine Code"
  • Ellipses are not clickable at the end of the Query Bar URL
  • Label of the "Clear Query" button of the Query Bar is not displayed correctly
  • The "Thumbnail View" of Sample Profiles is not opening the dedicated full size modal histogram bars
  • Clicking on a case ID does not remove the case ID from the Query Bar
  • Vertical dividers are missing within the faceted search bar within the Explore Dashboard page
  • An underscore is displayed for the OFF TREATMENT node
  • Incorrect colors ascribed to nodes with data vs. nodes without within the Clinical Data tab of the Study Details page
  • Text is not clearly visible in Local Find feature
  • Study-level file name hyperlinks within the Global Search feature do not redirect to respective Study Details page
  • Programs and Studies donut disappears from the Explore Dashboard page
  • Design specification errors of logos in the footer
  • New version of JBrowse is missing dependencies
  • Export and download of files from the "My Files" Cart page only includes the first page of files
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