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@CDCgov

Centers for Disease Control and Prevention

CDC's collaborative software projects to protect America from health, safety, and security threats, both foreign and in the U.S.
README.md

CDCGov Organization

This is CDC's GitHub organization for collaborating on open source projects. More information on CDC's open collaboration projects is available at openCDC.

Check out our Open Source Practices and please suggest any ideas for improvement by sending a pull request.

Check out a portal of all the projects hosted in the CDCGov domain. (thanks to Tony Boyles)

If you would like to create a new project, please complete this form logging in with your CDC credentials.

If you would like to join the CDCGov organization, or would like to suggest some others to join, please drop an issue into the template repo.

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  1. cdcgov.github.io cdcgov.github.io Public

    Portal site for all CDCgov projects, https://cdcgov.github.io

    HTML 20 16

  2. template template Public template

    Template repository with rules, practices, and privacy, license, records notices to help people use the CDCgov GitHub organization.

    32 41

Repositories

Showing 10 of 417 repositories
  • prime-reportstream Public

    ReportStream is a public intermediary tool for delivery of data between different parts of the healthcare ecosystem.

    CDCgov/prime-reportstream’s past year of commit activity
    Kotlin 74 CC0-1.0 41 1,216 146 Updated Dec 26, 2024
  • phoenix Public

    🔥🐦🔥PHoeNIx: a platform agnostic pipeline for healthcare-associated and antimicrobial resistant pathogens

    CDCgov/phoenix’s past year of commit activity
    Python 60 Apache-2.0 19 10 2 Updated Dec 26, 2024
  • eMKF Public
    CDCgov/eMKF’s past year of commit activity
    SAS 2 Apache-2.0 2 0 0 Updated Dec 25, 2024
  • Opioid_SUD_MHI_MedCodes Public

    Code to flag ICD-10-CM codes related to opioid involvement, substance use disorder, and mental health issues in structured hospital data

    CDCgov/Opioid_SUD_MHI_MedCodes’s past year of commit activity
    Python 6 3 0 0 Updated Dec 25, 2024
  • covid19-forecast-hub Public

    A repository run by the US CDC to collect forecasts of weekly incident COVID-19 hospital admissions.

    CDCgov/covid19-forecast-hub’s past year of commit activity
    R 7 Apache-2.0 11 10 2 Updated Dec 25, 2024
  • ww-inference-model Public

    An in-development R package and a Bayesian hierarchical model jointly fitting multiple "local" wastewater data streams and "global" case count data to produce nowcasts and forecasts of both observations

    CDCgov/ww-inference-model’s past year of commit activity
    R 21 Apache-2.0 3 75 (3 issues need help) 5 Updated Dec 25, 2024
  • cdc-open-viz Public

    CDC OpenViz is a library of React packages for data visualization.

    CDCgov/cdc-open-viz’s past year of commit activity
    TypeScript 35 Apache-2.0 21 0 7 Updated Dec 24, 2024
  • trusted-intermediary Public

    Bringing together healthcare providers by reducing the connection burden.

    CDCgov/trusted-intermediary’s past year of commit activity
    Groovy 11 Apache-2.0 6 151 4 Updated Dec 24, 2024
  • dibbs-query-connector Public

    A FHIR client allowing public health agencies to query health care organizations directly or via a TEFCA QHIN

    CDCgov/dibbs-query-connector’s past year of commit activity
    TypeScript 4 CC0-1.0 1 40 5 Updated Dec 24, 2024
  • data-exchange-fhir Public

    Enterprise Data Exchange (DEX) is a new cloud-native centralized data ingestion, validation, and observation service scoped for common data types (HL7, FHIR, CDA, XML, CSV) sent to the CDC. It helps public health stakeholders who send data to the CDC while reducing the maintenance efforts, complexity, and duplication of ingestion points to CDC.

    CDCgov/data-exchange-fhir’s past year of commit activity
    C# 11 Apache-2.0 3 157 4 Updated Dec 24, 2024
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