no numba and temp fix warnings #934
8 fail, 699 pass in 8m 48s
Annotations
Check warning on line 0 in climada.hazard.test.test_tc_tracks_synth.TestSynth
github-actions / Core / Unit Test Results (3.9)
test_random_walk_decay_pass (climada.hazard.test.test_tc_tracks_synth.TestSynth) failed
tests_xml/tests.xml [took 0s]
Raw output
ValueError: Set `adjust_intensity` to "legacy_decay" or `decay` to False.
self = <climada.hazard.test.test_tc_tracks_synth.TestSynth testMethod=test_random_walk_decay_pass>
def test_random_walk_decay_pass(self):
"""Test land decay is called from calc_perturbed_trajectories."""
assert TC_ANDREW_FL.is_file()
tc_track = tc.TCTracks.from_processed_ibtracs_csv(TC_ANDREW_FL)
nb_synth_tracks = 2
# should work if using global parameters
with self.assertLogs('climada.hazard.tc_tracks_synth', level='DEBUG') as cm0:
> tc_track.calc_perturbed_trajectories(nb_synth_tracks=nb_synth_tracks, seed=25, decay=True,
use_global_decay_params=True)
climada/hazard/test/test_tc_tracks_synth.py:605:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
climada/hazard/tc_tracks.py:1152: in calc_perturbed_trajectories
climada.hazard.tc_tracks_synth.calc_perturbed_trajectories(self, **kwargs)
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
tracks = <climada.hazard.tc_tracks.TCTracks object at 0x7fb45c282d00>
nb_synth_tracks = 2, max_shift_ini = 0.75, max_dspeed_rel = 0.3
max_ddirection = 0.008726646259971648, autocorr_dspeed = 0.85
autocorr_ddirection = 0.5, decay_ddirection_hourly = 0.016666666666666666
seed = 25, adjust_intensity = 'explicit', central_pressure_pert = 7.5
decay = True, use_global_decay_params = True, extend_track = True, pool = None
def calc_perturbed_trajectories(
tracks,
nb_synth_tracks: int = 9,
max_shift_ini: float = 0.75,
max_dspeed_rel: float = 0.3,
max_ddirection: float = np.pi / 360,
autocorr_dspeed: float = 0.85,
autocorr_ddirection: float = 0.5,
decay_ddirection_hourly: float = 1/(2.5*24),
seed: int = CONFIG.hazard.trop_cyclone.random_seed.int(),
adjust_intensity: str = 'explicit',
central_pressure_pert: float = 7.5,
decay: bool = None,
use_global_decay_params: bool = True,
extend_track: bool = True,
pool: AbstractWorkerPool = None,
):
"""
Generate synthetic tracks based on directed random walk. An ensemble of nb_synth_tracks
synthetic tracks is computed for every track contained in self.
The methodology perturbs the tracks locations, and if decay is True it additionally
includes decay of wind speed and central pressure drop after landfall. No other track
parameter is perturbed.
The track starting point location is perturbed by random uniform values of
magnitude up to max_shift_ini in both longitude and latitude. Then, each segment
between two consecutive points is perturbed in direction and distance (i.e.,
translational speed). These perturbations can be correlated in time, i.e.,
the perturbation in direction applied to segment i is correlated with the perturbation
in direction applied to segment i-1 (and similarly for the perturbation in translational
speed).
Perturbations in track direction and temporal auto-correlations in perturbations are
on an hourly basis, and the perturbations in translational speed is relative.
Hence, the parameter values are relatively insensitive to the temporal
resolution of the tracks. Note however that all tracks should be at the same
temporal resolution, which can be achieved using equal_timestep().
max_dspeed_rel and autocorr_dspeed control the spread along the track ('what distance
does the track run for'), while max_ddirection and autocorr_ddirection control the spread
perpendicular to the track movement ('how does the track diverge in direction').
max_dspeed_rel and max_ddirection control the amplitude of perturbations at each track
timestep but perturbations may tend to compensate each other over time, leading to
a similar location at the end of the track, while autocorr_dspeed and autocorr_ddirection
control how these perturbations persist in time and hence the amplitude of the
perturbations towards the end of the track.
Note that the default parameter values have been only roughly calibrated so that
the frequency of tracks in each 5x5degree box remains approximately constant.
This is not an in-depth calibration and should be treated as such.
The object is mutated in-place.
Parameters
----------
tracks : climada.hazard.TCTracks
Tracks data.
nb_synth_tracks : int, optional
Number of ensemble members per track. Default: 9.
max_shift_ini : float, optional
Amplitude of max random starting point shift in decimal degree
(up to +/-max_shift_ini for longitude and latitude). Default: 0.75.
max_dspeed_rel : float, optional
Amplitude of translation speed perturbation in relative terms
(e.g., 0.2 for +/-20%). Default: 0.3.
max_ddirection : float, optional
Amplitude of track direction (bearing angle) perturbation
per hour, in radians. Default: pi/360.
autocorr_dspeed : float, optional
Temporal autocorrelation in translation speed perturbation
at a lag of 1 hour. Default: 0.85.
autocorr_ddirection : float, optional
Temporal autocorrelation of track direction perturbation
at a lag of 1 hour. Default: 0.5.
decay_ddirection_hourly : float, optional
Exponential decay parameter applied to reduce the track direction
perturbation with track time, in units of "per hour". Set to larger than
0 to prevent long tracks to deviate too much from their historical
counterpart. Default: 1/(2.5*24) (i.e. per 2.5 days).
seed : int, optional
Random number generator seed for replicability of random walk.
Put negative value if you don't want to use it. Default: configuration file.
adjust_intensity : str, optional
Whether and how tropical cyclone intensity (central pressure,
max_sustained_wind) should be modelled. One of 'explicit',
'legacy_decay', or 'none'.
For 'explicit', intensity as well as radius_oci (outermost closed isobar)
and radius_max_wind are statistically modelled depending on landfalls in
historical and synthetic tracks (track intensification, peak intensity
duration as well as intensity decay over the ocean and over land are
explicitly modelled).
For 'legacy_decay', a landfall decay is applied when a synthetic track
reached land; however when a synthetic track is over the ocean while its
historical counterpart was over land, intensity will be underestimated.
For 'none', the track intensity will be the same as the historical track
independently on whether both tracks are over land or the ocean.
For None, will be set to 'explicit'.
Default: None (i.e., 'explicit').
central_pressure_pert : float, optional
Magnitude of the intensity perturbation (in mbar). This value is used to
perturb the maximum intensity (lowest central_pressure value) when
adjust_intensity is True. Perturbations are generated from a normal
distribution with mean=0 and sd=central_pressure_pert/2 constrained
between -central_pressure_pert and +central_pressure_pert. Default: 7.5
(corresponds to about 10 kn).
decay : bool, optional
Deprecated, for backward compatibility only. If True, equivalent to
setting 'adjust_intensity' to 'legacy_decay'. If False, equivalent to
setting 'adjust_intensity' to 'none'. Default: None (i.e. rely on the
value of 'adjust_intensity').
use_global_decay_params : bool, optional
Whether to use precomputed global parameter values for landfall decay
obtained from IBTrACS (1980-2019). If False, parameters are fitted
using historical tracks in input parameter 'tracks', in which case the
landfall decay applied depends on the tracks passed as an input and may
not be robust if few historical tracks make landfall in this object.
Default: True.
pool : pathos.pool, optional
Pool that will be used for parallel computation when applicable. If not given, the
pool attribute of `tracks` will be used. Default: None
"""
if decay is not None:
LOGGER.warning("`decay` is deprecated. "
"Use `adjust_intensity` instead.")
if adjust_intensity == 'explicit':
> raise ValueError(
'Set `adjust_intensity` to "legacy_decay" or `decay` to False.'
)
E ValueError: Set `adjust_intensity` to "legacy_decay" or `decay` to False.
climada/hazard/tc_tracks_synth.py:361: ValueError
Check warning on line 0 in climada.hazard.test.test_tc_tracks_synth.TestSynth
github-actions / Core / Unit Test Results (3.9)
test_random_walk_identical_pass (climada.hazard.test.test_tc_tracks_synth.TestSynth) failed
tests_xml/tests.xml [took 0s]
Raw output
ValueError: Set `adjust_intensity` to "legacy_decay" or `decay` to False.
self = <climada.hazard.test.test_tc_tracks_synth.TestSynth testMethod=test_random_walk_identical_pass>
def test_random_walk_identical_pass(self):
"""Test 0 perturbation leads to identical tracks."""
tc_track = tc.TCTracks.from_processed_ibtracs_csv(TC_ANDREW_FL)
nb_synth_tracks = 2
> tc_track.calc_perturbed_trajectories(nb_synth_tracks=nb_synth_tracks,
max_shift_ini=0, max_dspeed_rel=0, max_ddirection=0, decay=False)
climada/hazard/test/test_tc_tracks_synth.py:632:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
climada/hazard/tc_tracks.py:1152: in calc_perturbed_trajectories
climada.hazard.tc_tracks_synth.calc_perturbed_trajectories(self, **kwargs)
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
tracks = <climada.hazard.tc_tracks.TCTracks object at 0x7fb45c2c0160>
nb_synth_tracks = 2, max_shift_ini = 0, max_dspeed_rel = 0, max_ddirection = 0
autocorr_dspeed = 0.85, autocorr_ddirection = 0.5
decay_ddirection_hourly = 0.016666666666666666, seed = 54
adjust_intensity = 'explicit', central_pressure_pert = 7.5, decay = False
use_global_decay_params = True, extend_track = True, pool = None
def calc_perturbed_trajectories(
tracks,
nb_synth_tracks: int = 9,
max_shift_ini: float = 0.75,
max_dspeed_rel: float = 0.3,
max_ddirection: float = np.pi / 360,
autocorr_dspeed: float = 0.85,
autocorr_ddirection: float = 0.5,
decay_ddirection_hourly: float = 1/(2.5*24),
seed: int = CONFIG.hazard.trop_cyclone.random_seed.int(),
adjust_intensity: str = 'explicit',
central_pressure_pert: float = 7.5,
decay: bool = None,
use_global_decay_params: bool = True,
extend_track: bool = True,
pool: AbstractWorkerPool = None,
):
"""
Generate synthetic tracks based on directed random walk. An ensemble of nb_synth_tracks
synthetic tracks is computed for every track contained in self.
The methodology perturbs the tracks locations, and if decay is True it additionally
includes decay of wind speed and central pressure drop after landfall. No other track
parameter is perturbed.
The track starting point location is perturbed by random uniform values of
magnitude up to max_shift_ini in both longitude and latitude. Then, each segment
between two consecutive points is perturbed in direction and distance (i.e.,
translational speed). These perturbations can be correlated in time, i.e.,
the perturbation in direction applied to segment i is correlated with the perturbation
in direction applied to segment i-1 (and similarly for the perturbation in translational
speed).
Perturbations in track direction and temporal auto-correlations in perturbations are
on an hourly basis, and the perturbations in translational speed is relative.
Hence, the parameter values are relatively insensitive to the temporal
resolution of the tracks. Note however that all tracks should be at the same
temporal resolution, which can be achieved using equal_timestep().
max_dspeed_rel and autocorr_dspeed control the spread along the track ('what distance
does the track run for'), while max_ddirection and autocorr_ddirection control the spread
perpendicular to the track movement ('how does the track diverge in direction').
max_dspeed_rel and max_ddirection control the amplitude of perturbations at each track
timestep but perturbations may tend to compensate each other over time, leading to
a similar location at the end of the track, while autocorr_dspeed and autocorr_ddirection
control how these perturbations persist in time and hence the amplitude of the
perturbations towards the end of the track.
Note that the default parameter values have been only roughly calibrated so that
the frequency of tracks in each 5x5degree box remains approximately constant.
This is not an in-depth calibration and should be treated as such.
The object is mutated in-place.
Parameters
----------
tracks : climada.hazard.TCTracks
Tracks data.
nb_synth_tracks : int, optional
Number of ensemble members per track. Default: 9.
max_shift_ini : float, optional
Amplitude of max random starting point shift in decimal degree
(up to +/-max_shift_ini for longitude and latitude). Default: 0.75.
max_dspeed_rel : float, optional
Amplitude of translation speed perturbation in relative terms
(e.g., 0.2 for +/-20%). Default: 0.3.
max_ddirection : float, optional
Amplitude of track direction (bearing angle) perturbation
per hour, in radians. Default: pi/360.
autocorr_dspeed : float, optional
Temporal autocorrelation in translation speed perturbation
at a lag of 1 hour. Default: 0.85.
autocorr_ddirection : float, optional
Temporal autocorrelation of track direction perturbation
at a lag of 1 hour. Default: 0.5.
decay_ddirection_hourly : float, optional
Exponential decay parameter applied to reduce the track direction
perturbation with track time, in units of "per hour". Set to larger than
0 to prevent long tracks to deviate too much from their historical
counterpart. Default: 1/(2.5*24) (i.e. per 2.5 days).
seed : int, optional
Random number generator seed for replicability of random walk.
Put negative value if you don't want to use it. Default: configuration file.
adjust_intensity : str, optional
Whether and how tropical cyclone intensity (central pressure,
max_sustained_wind) should be modelled. One of 'explicit',
'legacy_decay', or 'none'.
For 'explicit', intensity as well as radius_oci (outermost closed isobar)
and radius_max_wind are statistically modelled depending on landfalls in
historical and synthetic tracks (track intensification, peak intensity
duration as well as intensity decay over the ocean and over land are
explicitly modelled).
For 'legacy_decay', a landfall decay is applied when a synthetic track
reached land; however when a synthetic track is over the ocean while its
historical counterpart was over land, intensity will be underestimated.
For 'none', the track intensity will be the same as the historical track
independently on whether both tracks are over land or the ocean.
For None, will be set to 'explicit'.
Default: None (i.e., 'explicit').
central_pressure_pert : float, optional
Magnitude of the intensity perturbation (in mbar). This value is used to
perturb the maximum intensity (lowest central_pressure value) when
adjust_intensity is True. Perturbations are generated from a normal
distribution with mean=0 and sd=central_pressure_pert/2 constrained
between -central_pressure_pert and +central_pressure_pert. Default: 7.5
(corresponds to about 10 kn).
decay : bool, optional
Deprecated, for backward compatibility only. If True, equivalent to
setting 'adjust_intensity' to 'legacy_decay'. If False, equivalent to
setting 'adjust_intensity' to 'none'. Default: None (i.e. rely on the
value of 'adjust_intensity').
use_global_decay_params : bool, optional
Whether to use precomputed global parameter values for landfall decay
obtained from IBTrACS (1980-2019). If False, parameters are fitted
using historical tracks in input parameter 'tracks', in which case the
landfall decay applied depends on the tracks passed as an input and may
not be robust if few historical tracks make landfall in this object.
Default: True.
pool : pathos.pool, optional
Pool that will be used for parallel computation when applicable. If not given, the
pool attribute of `tracks` will be used. Default: None
"""
if decay is not None:
LOGGER.warning("`decay` is deprecated. "
"Use `adjust_intensity` instead.")
if adjust_intensity == 'explicit':
> raise ValueError(
'Set `adjust_intensity` to "legacy_decay" or `decay` to False.'
)
E ValueError: Set `adjust_intensity` to "legacy_decay" or `decay` to False.
climada/hazard/tc_tracks_synth.py:361: ValueError
Check warning on line 0 in climada.hazard.test.test_tc_tracks_synth.TestSynth
github-actions / Core / Unit Test Results (3.9)
test_random_walk_ref_pass (climada.hazard.test.test_tc_tracks_synth.TestSynth) failed
tests_xml/tests.xml [took 0s]
Raw output
ValueError: Set `adjust_intensity` to "legacy_decay" or `decay` to False.
self = <climada.hazard.test.test_tc_tracks_synth.TestSynth testMethod=test_random_walk_ref_pass>
def test_random_walk_ref_pass(self):
"""Test against MATLAB reference."""
tc_track = tc.TCTracks.from_processed_ibtracs_csv(TEST_TRACK_SHORT)
nb_synth_tracks = 2
> tc_track.calc_perturbed_trajectories(nb_synth_tracks=nb_synth_tracks, seed=25, decay=False, decay_ddirection_hourly=0)
climada/hazard/test/test_tc_tracks_synth.py:564:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
climada/hazard/tc_tracks.py:1152: in calc_perturbed_trajectories
climada.hazard.tc_tracks_synth.calc_perturbed_trajectories(self, **kwargs)
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
tracks = <climada.hazard.tc_tracks.TCTracks object at 0x7fb45c36c220>
nb_synth_tracks = 2, max_shift_ini = 0.75, max_dspeed_rel = 0.3
max_ddirection = 0.008726646259971648, autocorr_dspeed = 0.85
autocorr_ddirection = 0.5, decay_ddirection_hourly = 0, seed = 25
adjust_intensity = 'explicit', central_pressure_pert = 7.5, decay = False
use_global_decay_params = True, extend_track = True, pool = None
def calc_perturbed_trajectories(
tracks,
nb_synth_tracks: int = 9,
max_shift_ini: float = 0.75,
max_dspeed_rel: float = 0.3,
max_ddirection: float = np.pi / 360,
autocorr_dspeed: float = 0.85,
autocorr_ddirection: float = 0.5,
decay_ddirection_hourly: float = 1/(2.5*24),
seed: int = CONFIG.hazard.trop_cyclone.random_seed.int(),
adjust_intensity: str = 'explicit',
central_pressure_pert: float = 7.5,
decay: bool = None,
use_global_decay_params: bool = True,
extend_track: bool = True,
pool: AbstractWorkerPool = None,
):
"""
Generate synthetic tracks based on directed random walk. An ensemble of nb_synth_tracks
synthetic tracks is computed for every track contained in self.
The methodology perturbs the tracks locations, and if decay is True it additionally
includes decay of wind speed and central pressure drop after landfall. No other track
parameter is perturbed.
The track starting point location is perturbed by random uniform values of
magnitude up to max_shift_ini in both longitude and latitude. Then, each segment
between two consecutive points is perturbed in direction and distance (i.e.,
translational speed). These perturbations can be correlated in time, i.e.,
the perturbation in direction applied to segment i is correlated with the perturbation
in direction applied to segment i-1 (and similarly for the perturbation in translational
speed).
Perturbations in track direction and temporal auto-correlations in perturbations are
on an hourly basis, and the perturbations in translational speed is relative.
Hence, the parameter values are relatively insensitive to the temporal
resolution of the tracks. Note however that all tracks should be at the same
temporal resolution, which can be achieved using equal_timestep().
max_dspeed_rel and autocorr_dspeed control the spread along the track ('what distance
does the track run for'), while max_ddirection and autocorr_ddirection control the spread
perpendicular to the track movement ('how does the track diverge in direction').
max_dspeed_rel and max_ddirection control the amplitude of perturbations at each track
timestep but perturbations may tend to compensate each other over time, leading to
a similar location at the end of the track, while autocorr_dspeed and autocorr_ddirection
control how these perturbations persist in time and hence the amplitude of the
perturbations towards the end of the track.
Note that the default parameter values have been only roughly calibrated so that
the frequency of tracks in each 5x5degree box remains approximately constant.
This is not an in-depth calibration and should be treated as such.
The object is mutated in-place.
Parameters
----------
tracks : climada.hazard.TCTracks
Tracks data.
nb_synth_tracks : int, optional
Number of ensemble members per track. Default: 9.
max_shift_ini : float, optional
Amplitude of max random starting point shift in decimal degree
(up to +/-max_shift_ini for longitude and latitude). Default: 0.75.
max_dspeed_rel : float, optional
Amplitude of translation speed perturbation in relative terms
(e.g., 0.2 for +/-20%). Default: 0.3.
max_ddirection : float, optional
Amplitude of track direction (bearing angle) perturbation
per hour, in radians. Default: pi/360.
autocorr_dspeed : float, optional
Temporal autocorrelation in translation speed perturbation
at a lag of 1 hour. Default: 0.85.
autocorr_ddirection : float, optional
Temporal autocorrelation of track direction perturbation
at a lag of 1 hour. Default: 0.5.
decay_ddirection_hourly : float, optional
Exponential decay parameter applied to reduce the track direction
perturbation with track time, in units of "per hour". Set to larger than
0 to prevent long tracks to deviate too much from their historical
counterpart. Default: 1/(2.5*24) (i.e. per 2.5 days).
seed : int, optional
Random number generator seed for replicability of random walk.
Put negative value if you don't want to use it. Default: configuration file.
adjust_intensity : str, optional
Whether and how tropical cyclone intensity (central pressure,
max_sustained_wind) should be modelled. One of 'explicit',
'legacy_decay', or 'none'.
For 'explicit', intensity as well as radius_oci (outermost closed isobar)
and radius_max_wind are statistically modelled depending on landfalls in
historical and synthetic tracks (track intensification, peak intensity
duration as well as intensity decay over the ocean and over land are
explicitly modelled).
For 'legacy_decay', a landfall decay is applied when a synthetic track
reached land; however when a synthetic track is over the ocean while its
historical counterpart was over land, intensity will be underestimated.
For 'none', the track intensity will be the same as the historical track
independently on whether both tracks are over land or the ocean.
For None, will be set to 'explicit'.
Default: None (i.e., 'explicit').
central_pressure_pert : float, optional
Magnitude of the intensity perturbation (in mbar). This value is used to
perturb the maximum intensity (lowest central_pressure value) when
adjust_intensity is True. Perturbations are generated from a normal
distribution with mean=0 and sd=central_pressure_pert/2 constrained
between -central_pressure_pert and +central_pressure_pert. Default: 7.5
(corresponds to about 10 kn).
decay : bool, optional
Deprecated, for backward compatibility only. If True, equivalent to
setting 'adjust_intensity' to 'legacy_decay'. If False, equivalent to
setting 'adjust_intensity' to 'none'. Default: None (i.e. rely on the
value of 'adjust_intensity').
use_global_decay_params : bool, optional
Whether to use precomputed global parameter values for landfall decay
obtained from IBTrACS (1980-2019). If False, parameters are fitted
using historical tracks in input parameter 'tracks', in which case the
landfall decay applied depends on the tracks passed as an input and may
not be robust if few historical tracks make landfall in this object.
Default: True.
pool : pathos.pool, optional
Pool that will be used for parallel computation when applicable. If not given, the
pool attribute of `tracks` will be used. Default: None
"""
if decay is not None:
LOGGER.warning("`decay` is deprecated. "
"Use `adjust_intensity` instead.")
if adjust_intensity == 'explicit':
> raise ValueError(
'Set `adjust_intensity` to "legacy_decay" or `decay` to False.'
)
E ValueError: Set `adjust_intensity` to "legacy_decay" or `decay` to False.
climada/hazard/tc_tracks_synth.py:361: ValueError
Check warning on line 0 in climada.hazard.test.test_tc_tracks_synth.TestSynthIdChunks
github-actions / Core / Unit Test Results (3.9)
test_add_id_synth_chunks_complex (climada.hazard.test.test_tc_tracks_synth.TestSynthIdChunks) failed
tests_xml/tests.xml [took 0s]
Raw output
AssertionError:
Arrays are not equal
Mismatched elements: 2 / 9 (22.2%)
Max absolute difference: 1
Max relative difference: 0.
x: array([ 0, 0, 1, 1, 1, -1, -1, -1, 2])
y: array([ 0, 0, 0, 0, 1, -1, -1, -1, 2])
self = <climada.hazard.test.test_tc_tracks_synth.TestSynthIdChunks testMethod=test_add_id_synth_chunks_complex>
def test_add_id_synth_chunks_complex(self):
"""Test _add_id_synth_chunks_shift_init for idealized cases"""
on_land_hist = np.array([True, True, False, False, True, True, True, False, False])
on_land = np.array([True, False, False, False, False, True, True, True, False])
pcen = np.arange(0, len(on_land))
# expected values
expected_id_chunk = np.array([0, 0, 0, 0, 1, -1, -1, -1, 2])
expected_no_chunks_land = 1
expected_no_chunks_sea = 2
expected_pcen = np.append(pcen[1:], pcen[-1])
# create fake xarray with time, on_land and on_land_hist
tc_track = dummy_track_builder({'on_land': on_land, 'on_land_hist': on_land_hist, 'central_pressure': pcen.copy()})
# call _add_id_synth_chunks
synth_track, no_chunks_sea, no_chunks_land, _ = tc_synth._add_id_synth_chunks_shift_init(tc_track)
# check output
self.assertEqual(no_chunks_land, expected_no_chunks_land)
self.assertEqual(no_chunks_sea, expected_no_chunks_sea)
> np.testing.assert_array_equal(synth_track.id_chunk.data, expected_id_chunk)
climada/hazard/test/test_tc_tracks_synth.py:804:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
args = (<built-in function eq>, array([ 0, 0, 1, 1, 1, -1, -1, -1, 2]), array([ 0, 0, 0, 0, 1, -1, -1, -1, 2]))
kwds = {'err_msg': '', 'header': 'Arrays are not equal', 'strict': False, 'verbose': True}
@wraps(func)
def inner(*args, **kwds):
with self._recreate_cm():
> return func(*args, **kwds)
E AssertionError:
E Arrays are not equal
E
E Mismatched elements: 2 / 9 (22.2%)
E Max absolute difference: 1
E Max relative difference: 0.
E x: array([ 0, 0, 1, 1, 1, -1, -1, -1, 2])
E y: array([ 0, 0, 0, 0, 1, -1, -1, -1, 2])
../../../micromamba/envs/climada_env_3.9/lib/python3.9/contextlib.py:79: AssertionError
Check warning on line 0 in climada.hazard.test.test_tc_tracks_synth.TestSynthIdChunks
github-actions / Core / Unit Test Results (3.9)
test_add_id_synth_chunks_start_over_land (climada.hazard.test.test_tc_tracks_synth.TestSynthIdChunks) failed
tests_xml/tests.xml [took 0s]
Raw output
KeyError: "['lat', 'lon'] not found in axis"
self = <climada.hazard.test.test_tc_tracks_synth.TestSynthIdChunks testMethod=test_add_id_synth_chunks_start_over_land>
def test_add_id_synth_chunks_start_over_land(self):
"""Test _add_id_synth_chunks_shift_init for track starting over land"""
on_land_hist = np.array([True, True, False, False, True, True, False, False])
on_land_hist2 = np.array([False, False, False, False, True, True, False, False])
on_land = np.array([True, False, False, False, True, True, True, False])
pcen = np.arange(0, len(on_land))
# expected values
expected_id_chunk = np.array([0, 0, 0, 1, -1, -1, -1, 2])
expected_no_chunks_land = 1
expected_no_chunks_sea = 1
# fist case: shifted backward
expected_pcen = np.append(pcen[1:], pcen[-1])
# second case: shifted forward
expected_pcen2 = np.append(pcen[0], pcen[:-1])
# create fake xarray with time, on_land and on_land_hist
tc_track = dummy_track_builder({'on_land': on_land, 'on_land_hist': on_land_hist, 'central_pressure': pcen.copy()})
tc_track2 = dummy_track_builder({'on_land': on_land, 'on_land_hist': on_land_hist2, 'central_pressure': pcen.copy()})
# call _add_id_synth_chunks
synth_track, no_chunks_sea, no_chunks_land, _ = tc_synth._add_id_synth_chunks_shift_init(
tc_track, 3
)
> synth_track2, no_chunks_sea2, no_chunks_land2, _ = tc_synth._add_id_synth_chunks_shift_init(tc_track2, 3)
climada/hazard/test/test_tc_tracks_synth.py:757:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
climada/hazard/tc_tracks_synth.py:2395: in _add_id_synth_chunks_shift_init
track_shift_values = track.isel(
../../../micromamba/envs/climada_env_3.9/lib/python3.9/site-packages/pandas/core/frame.py:5344: in drop
return super().drop(
../../../micromamba/envs/climada_env_3.9/lib/python3.9/site-packages/pandas/core/generic.py:4711: in drop
obj = obj._drop_axis(labels, axis, level=level, errors=errors)
../../../micromamba/envs/climada_env_3.9/lib/python3.9/site-packages/pandas/core/generic.py:4753: in _drop_axis
new_axis = axis.drop(labels, errors=errors)
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = Index(['time', 'on_land', 'on_land_hist', 'central_pressure', 'time_step',
'max_sustained_wind', 'id_chunk'],
dtype='object')
labels = array(['time', 'lat', 'lon'], dtype=object), errors = 'raise'
def drop(
self,
labels: Index | np.ndarray | Iterable[Hashable],
errors: IgnoreRaise = "raise",
) -> Index:
"""
Make new Index with passed list of labels deleted.
Parameters
----------
labels : array-like or scalar
errors : {'ignore', 'raise'}, default 'raise'
If 'ignore', suppress error and existing labels are dropped.
Returns
-------
Index
Will be same type as self, except for RangeIndex.
Raises
------
KeyError
If not all of the labels are found in the selected axis
Examples
--------
>>> idx = pd.Index(['a', 'b', 'c'])
>>> idx.drop(['a'])
Index(['b', 'c'], dtype='object')
"""
if not isinstance(labels, Index):
# avoid materializing e.g. RangeIndex
arr_dtype = "object" if self.dtype == "object" else None
labels = com.index_labels_to_array(labels, dtype=arr_dtype)
indexer = self.get_indexer_for(labels)
mask = indexer == -1
if mask.any():
if errors != "ignore":
> raise KeyError(f"{labels[mask].tolist()} not found in axis")
E KeyError: "['lat', 'lon'] not found in axis"
../../../micromamba/envs/climada_env_3.9/lib/python3.9/site-packages/pandas/core/indexes/base.py:7000: KeyError
Check warning on line 0 in climada.hazard.test.test_tc_tracks_synth.TestSynthDataFit
github-actions / Core / Unit Test Results (3.9)
test_get_fit_order (climada.hazard.test.test_tc_tracks_synth.TestSynthDataFit) failed
tests_xml/tests.xml [took 0s]
Raw output
TypeError: _get_fit_order() got an unexpected keyword argument 'var_name'
self = <climada.hazard.test.test_tc_tracks_synth.TestSynthDataFit testMethod=test_get_fit_order>
def test_get_fit_order(self):
"""Test _get_fit_order"""
# sample values
pcen_vals = np.arange(880, 1000)
pcen_pert = 15
var_names = ['max_sustained_wind', 'radius_max_wind', "radius_oci"]
# 1 for max_sustained_wind
> self.assertEqual(tc_synth._get_fit_order(pcen=pcen_vals, central_pressure_pert=pcen_pert, var_name=var_names[0]),
1)
E TypeError: _get_fit_order() got an unexpected keyword argument 'var_name'
climada/hazard/test/test_tc_tracks_synth.py:1111: TypeError
Check warning on line 0 in climada.hazard.test.test_tc_tracks_synth.TestSynthDataFit
github-actions / Core / Unit Test Results (3.9)
test_get_fit_single_phase (climada.hazard.test.test_tc_tracks_synth.TestSynthDataFit) failed
tests_xml/tests.xml [took 0s]
Raw output
NameError: name '_get_fit_single_phase' is not defined
self = <climada.hazard.test.test_tc_tracks_synth.TestSynthDataFit testMethod=test_get_fit_single_phase>
def test_get_fit_single_phase(self):
"""Test _get_fit_single_phase"""
# sample:
pcen = np.concatenate([np.arange(1000,900,-5), np.arange(905,990,10)])
lons = np.repeat([-80], len(pcen))
lats = np.repeat([30], len(pcen))
vmax = tc._estimate_vmax(np.repeat([np.nan], len(pcen)), lons, lats, pcen)
rmax = tc.estimate_rmw(np.repeat([np.nan], len(pcen)), pcen)
roci = tc.estimate_roci(np.repeat([np.nan], len(pcen)), pcen)
tc_track = dummy_track_builder({
'central_pressure': np.concatenate([np.arange(1000,900,-5), np.arange(905,990,10)]),
'max_sustained_wind': vmax,
'radius_max_wind': rmax,
'radius_oci': roci
})
> res = _get_fit_single_phase(tc_track, 15)
E NameError: name '_get_fit_single_phase' is not defined
climada/hazard/test/test_tc_tracks_synth.py:1165: NameError
Check warning on line 0 in climada.hazard.test.test_tc_tracks_synth.TestSynthDataFit
github-actions / Core / Unit Test Results (3.9)
test_prepare_data_piecewise (climada.hazard.test.test_tc_tracks_synth.TestSynthDataFit) failed
tests_xml/tests.xml [took 0s]
Raw output
NameError: name '_prepare_data_piecewise' is not defined
self = <climada.hazard.test.test_tc_tracks_synth.TestSynthDataFit testMethod=test_prepare_data_piecewise>
def test_prepare_data_piecewise(self):
"""Test _prepare_data_piecewise"""
# TODO
> x = _prepare_data_piecewise(np.arange(20), (0,5,12,20))
E NameError: name '_prepare_data_piecewise' is not defined
climada/hazard/test/test_tc_tracks_synth.py:1147: NameError