Repository to build the OmicsDM documentation

Live at: https://cnag-biomedical-informatics.github.io/omicsdm-documentation

This repository contains the source files to build the documentation for the OmicsDM data warehouse solution developed for the 3TR project (https://www.3tr-imi.eu).

The source code for the server and client can be found in the following repositories:

• https://github.com/CNAG-Biomedical-Informatics/omicsdm-server
• https://github.com/CNAG-Biomedical-Informatics/omicsdm-client

Context

OmicsDM started as the PhD thesis project of Ivo Christopher Leist (https://github.com/IvoLeist) and is since Q1 2022 in use by the 3TR consortium. Acting there as the data backbone for the storage and sharing of processed omics data and its patient's pheno-clinical information.

How to build the documentation

make venv
source venv/bin/activate
make build

Documentation deployment

The documentation is deployed to the GitHub pages. The deployment is done by the GitHub Actions workflow defined in the .github/workflows/deploy.yml file.

License

The documentation is licensed under the MIT license. See the LICENSE file for more details.