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@CSB-IG

Computational Systems Biology/Integrative Genomics

Computational Systems Biology/Integrative Genomics at National Institute of Genomic Medicine - México

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  1. tmr_search tmr_search Public

    Transcriptional Master Regulator search in Cancer, a pipeline using MARINa

    R 6 3

  2. literature literature Public

    Data mining, mostly medline. Text mining. Network based analyses.

    Shell 2 10

  3. rnw rnw Public

    regulation network workflow

    R 2 2

  4. miRNAseq_rnw miRNAseq_rnw Public

    miRNAseq regulatory networks

    R 2 1

  5. pa3bc pa3bc Public

    Pathway Analyses of Apoptosis and Autophagy on Breast Cancer

    R 2 3

  6. circos_rnaseq_tcga_brca circos_rnaseq_tcga_brca Public

    Circos plots of rnaseq interactions in tcga brca samples.

    Python 2

Repositories

Showing 10 of 56 repositories
  • CSB-IG.github.io Public
    CSB-IG/CSB-IG.github.io’s past year of commit activity
    SCSS 1 GPL-3.0 1 0 0 Updated Nov 2, 2024
  • EoN-Epidemics-on-Networks- Public

    Modeling epidemic phenomena in dynamic networks

    CSB-IG/EoN-Epidemics-on-Networks-’s past year of commit activity
    Python 1 0 0 0 Updated Oct 31, 2024
  • Periodontitis_diseasome Public

    Code to perform the analysis in "The molecular comorbidity network of Periodontal Disease

    CSB-IG/Periodontitis_diseasome’s past year of commit activity
    R 0 0 0 0 Updated Oct 2, 2024
  • Arabidopsis_TMR Public

    Transcriptional Master Regulators of mild drought in growing Arabidopsis leaves

    CSB-IG/Arabidopsis_TMR’s past year of commit activity
    R 1 GPL-3.0 0 0 0 Updated May 22, 2024
  • ROSMAP_MultiOmics Public

    MultiOmics exploration of ROSMAP database through network analysis

    CSB-IG/ROSMAP_MultiOmics’s past year of commit activity
    R 0 MIT 0 0 0 Updated Mar 1, 2024
  • MoNet-signatures Public

    Code repository associated to "Drug Repurposing for Basal Breast Cancer Subpopulations Using Modular Network Signatures" by H. Coria-Rodríguez, S. Ochoa, G. de Anda-Jáuregui and E. Hernández-Lemus

    CSB-IG/MoNet-signatures’s past year of commit activity
    R 0 2 0 0 Updated Dec 12, 2023
  • TF_motifs Public

    Code related to Rodrigo Trujillo's work on TF motifs in breast cancer

    CSB-IG/TF_motifs’s past year of commit activity
    R 0 MIT 0 0 0 Updated Oct 13, 2023
  • Neurociecias_RedesMulticapa-Python Public
    CSB-IG/Neurociecias_RedesMulticapa-Python’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Aug 15, 2023
  • Reformat_Table Public

    R code to turn a very busy table from a spreadsheet onto a number of individual text files. Each file contains the info of one row of the busy table

    CSB-IG/Reformat_Table’s past year of commit activity
    R 0 0 0 0 Updated Jul 20, 2023
  • SDI_PD Public

    Data and Code for Relationship between the Social Development Index and Self-Reported Periodontal Conditions

    CSB-IG/SDI_PD’s past year of commit activity
    R 0 0 0 0 Updated May 24, 2023
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