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@CellProfiling

CellProfiling

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  1. HPA-Cell-Segmentation HPA-Cell-Segmentation Public

    Python 95 27

  2. HPA-competition-solutions HPA-competition-solutions Public

    Team original solutions for the Human Protein Atlas image classification competition

    Jupyter Notebook 60 21

  3. SingleCellProteogenomics SingleCellProteogenomics Public

    Cell cycle analysis of single-cell proteomic and transcriptomic data for the FUCCI cell model

    Python 13 5

  4. HPA-competition HPA-competition Public

    Human Protein Atlas image classification competition

    Jupyter Notebook 12 3

  5. pipex pipex Public

    A pipeline to transform images into valuable analysis items

    Python 9 2

  6. Loc-CAT Loc-CAT Public

    The Cellular Annotation Tool

    Python 7 2

Repositories

Showing 10 of 54 repositories
  • cam_acq Public

    Python project to control microscope through client-server program.

    CellProfiling/cam_acq’s past year of commit activity
    Python 5 Apache-2.0 1 1 1 Updated Dec 26, 2024
  • camacq-plugins Public

    Plugins for camacq

    CellProfiling/camacq-plugins’s past year of commit activity
    Python 0 Apache-2.0 0 0 1 Updated Dec 26, 2024
  • subcell-embed Public
    CellProfiling/subcell-embed’s past year of commit activity
    Python 2 MIT 1 1 0 Updated Dec 19, 2024
  • pipex Public

    A pipeline to transform images into valuable analysis items

    CellProfiling/pipex’s past year of commit activity
    Python 9 MIT 2 0 0 Updated Dec 18, 2024
  • subcell-analysis Public
    CellProfiling/subcell-analysis’s past year of commit activity
    Jupyter Notebook 1 MIT 0 0 0 Updated Dec 17, 2024
  • Squid Public Forked from Cephla-Lab/Squid
    CellProfiling/Squid’s past year of commit activity
    Python 0 BSD-3-Clause 38 0 0 Updated Dec 14, 2024
  • bioe-postdoc-chalktalk Public

    Website for the BioE Postdoc Chalk Talk

    CellProfiling/bioe-postdoc-chalktalk’s past year of commit activity
    HTML 0 0 0 0 Updated Dec 12, 2024
  • SubCellPortable Public

    This is a convenient code wrapper to run Lundberg lab SubCell model in inference with your own images

    CellProfiling/SubCellPortable’s past year of commit activity
    Python 1 MIT 1 0 0 Updated Dec 9, 2024
  • HPACellSegmentatorPortable Public

    Just a rework of the HPA Cell Segmentator repository that works with modern and simple python libraries

    CellProfiling/HPACellSegmentatorPortable’s past year of commit activity
    Python 0 0 0 0 Updated Nov 26, 2024
  • ellviewer Public

    Simple and configurable layered viewer, serverless and zero-code configurable

    CellProfiling/ellviewer’s past year of commit activity
    HTML 0 MIT 0 0 0 Updated Nov 11, 2024
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