ClinicoPath

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ClinicoPath jamovi Module 🔬

A jamovi Module that contains main analysis used in ClinicoPathological research. ClinicoPath help researchers to generate natural language summaries of their dataset, generate cross tables with statistical tests, and survival analysis with survival tables, survival curves, and natural language summaries.

🔬👀📑🗃📊🏨🗄📇📖⚗📝🎶📈📉📃🖍 🔬🔬🏋🚴🚙👨💻 📸📺🎛🔭🔬💊🔐🍫🌸

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https://zenodo.org/account/settings/github/repository/sbalci/ClinicoPathJamoviModule

DOI 10.17605/OSF.IO/9SZUD

https://osf.io/9szud/

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Installation in jamovi

Installation via sideload jamovi

• Step 1: Download and install jamovi.

• Step 2: Download the relevant jmo file for your operating system from

  • a: For development version

• releases

• sourceforge.

  • b: For stable version

• windows: https://library.jamovi.org/win64/R3.6.1/ClinicoPath-0.0.1.jmo

• macOS: https://library.jamovi.org/macos/R3.6.1/ClinicoPath-0.0.1.jmo

• Step 3: And install using side-load as shown below:

Screenshots of Module

Descriptives

TableOne

Summary of Continuous Variables

Summary of Categorical Variables

Comparisons

Cross Table

GGStatsPlot

Survival

Univariate Survival Analysis

Multivariate Survival Analysis

Odds Ratio Table and Plot

Decision

Medical Decision

🔬🔬🔬🔬 UNDER CONSTRUCTION 🛠⛔️⚠️🔩

Decision Calculator

🔬🔬🔬🔬 UNDER CONSTRUCTION 🛠⛔️⚠️🔩

Correlation

Correlation

🔬🔬🔬🔬 UNDER CONSTRUCTION 🛠⛔️⚠️🔩

Agreement

Interrater Intrarater Reliability

🔬🔬🔬🔬 UNDER CONSTRUCTION 🛠⛔️⚠️🔩

Installation in R

You can install the development version from GitHub with:

# install.packages("devtools")
devtools::install_github("sbalci/ClinicoPathJamoviModule")

Acknowledgement

Made possible via the codes, help, and guidence of

• jamovi developer Jonathon Love,
• finalfit developer Ewen Harrison,
• ggstatsplot developer Indrajeet Patil,
• tangram developer Shawn Garbett,
• easystats developers ,
• report ,
• tableone,
• survival,
• survminer, and
• rstats community.

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Development Status

Code

Status

Check, CI

Recency, Updates

Webpage, Links, Size, Download

Dependencies

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