GitHub - CoREse/PocaCNV: A Tool to Detect Copy Number Variants from Population-Scale Genome Sequencing Data

CoREse / PocaCNV Public

A Tool to Detect Copy Number Variants from Population-Scale Genome Sequencing Data

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Name		Name	Last commit message	Last commit date
Latest commit History 234 Commits
DRP.py		DRP.py
Makefile		Makefile
addSampleName.py		addSampleName.py
benchlib.py		benchlib.py
benchmark.py		benchmark.py
benchmark_lib.py		benchmark_lib.py
benchmark_liu.py		benchmark_liu.py
calling.py		calling.py
cbs.py		cbs.py
cdlt		cdlt
cllprocessing.py		cllprocessing.py
consts.py		consts.py
contig.py		contig.py
cythonsetup.py		cythonsetup.py
dnacopy_cbs.r		dnacopy_cbs.r
dnacopy_cbs_multi.r		dnacopy_cbs_multi.r
drpprocessing.pyx		drpprocessing.pyx
extractRDData.py		extractRDData.py
filters.py		filters.py
getEDTrainData.py		getEDTrainData.py
getIS		getIS
getISFromStats.py		getISFromStats.py
getRDScores.cpp		getRDScores.cpp
globals.py		globals.py
jc.py		jc.py
jcinput		jcinput
jcinput.cpp		jcinput.cpp
jcio.py		jcio.py
jcrd.py		jcrd.py
joint.py		joint.py
logfy.py		logfy.py
note.py		note.py
plot.py		plot.py
pocacnv		pocacnv
rdprocessing.pyx		rdprocessing.pyx
rdread.py		rdread.py
readdepth.py		readdepth.py
readpair.py		readpair.py
readvcf.py		readvcf.py
report.py		report.py
rmlt		rmlt
rtest.py		rtest.py
sara.py		sara.py
sbs.py		sbs.py
sbs_old.py		sbs_old.py
statcnf.py		statcnf.py
test.py		test.py
testTrain.py		testTrain.py
tetest.py		tetest.py
tftest.py		tftest.py
trainScoring.py		trainScoring.py
trainScoringWhole.py		trainScoringWhole.py
trainScoringWhole2.py		trainScoringWhole2.py
traintest.py		traintest.py
transoldrdftonew.py		transoldrdftonew.py
transtemp.py		transtemp.py
triocnv2.py		triocnv2.py
utils.py		utils.py
variants.py		variants.py
view.py		view.py
view_mrdrs.py		view_mrdrs.py
wwindows.py		wwindows.py