Kmer Speed Test [Lua] #5
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| name: Kmer Speed Test [Lua] | |
| env: | |
| display: "Lua" | |
| lang: "lua" | |
| on: | |
| workflow_dispatch: | |
| push: | |
| branches: [ "main" ] | |
| paths: | |
| - "lua/**" | |
| pull_request: | |
| branches: [ "main" ] | |
| paths: | |
| - "lua/**" | |
| jobs: | |
| kmer: | |
| strategy: | |
| matrix: | |
| kmer: [11, 12, 13, 14, 15, 16, 17] | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Install luajit | |
| run: sudo apt install luajit -y | |
| - name: Create Result dir | |
| run: mkdir results | |
| - name: Run Tests | |
| run: echo "$(make LENGTH=${{ matrix.kmer }} LANGUAGES="${{ env.lang }}" -s)" > results/kmer_${{ matrix.kmer }}_${{ env.lang }}.rawresult.txt | |
| - name: Save result for kmer ${{ matrix.kmer }} ${{ env.lang }} | |
| uses: actions/upload-artifact@master | |
| with: | |
| name: ${{ matrix.kmer }}_${{ env.lang }} | |
| path: results/kmer_${{ matrix.kmer }}_${{ env.lang }}.rawresult.txt | |
| result: | |
| needs: [ "kmer" ] | |
| runs-on: ubuntu-22.04 | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Create Result dir | |
| run: mkdir results | |
| - name: Download raw results | |
| uses: actions/download-artifact@v3 | |
| with: | |
| path: results/ | |
| - name: Extract kmer11 time from result | |
| id: kmer11 | |
| run: | | |
| ls -la results/ | |
| echo "TIME=$(sh extract_data.sh 11 ${{ env.lang }})" >> $GITHUB_OUTPUT | |
| - name: Extract kmer12 time from result | |
| id: kmer12 | |
| run: | | |
| echo "TIME=$(sh extract_data.sh 12 ${{ env.lang }})" >> $GITHUB_OUTPUT | |
| - name: Extract kmer13 time from result | |
| id: kmer13 | |
| run: | | |
| echo "TIME=$(sh extract_data.sh 13 ${{ env.lang }})" >> $GITHUB_OUTPUT | |
| - name: Extract kmer14 time from result | |
| id: kmer14 | |
| run: | | |
| echo "TIME=$(sh extract_data.sh 14 ${{ env.lang }})" >> $GITHUB_OUTPUT | |
| - name: Extract kmer15 time from result | |
| id: kmer15 | |
| run: | | |
| echo "TIME=$(sh extract_data.sh 15 ${{ env.lang }})" >> $GITHUB_OUTPUT | |
| - name: Extract kmer16 time from result | |
| id: kmer16 | |
| run: | | |
| echo "TIME=$(sh extract_data.sh 16 ${{ env.lang }})" >> $GITHUB_OUTPUT | |
| - name: Extract kmer17 time from result | |
| id: kmer17 | |
| run: | | |
| echo "TIME=$(sh extract_data.sh 17 ${{ env.lang }})" >> $GITHUB_OUTPUT | |
| - name: Build Table | |
| run: | | |
| echo "" > $GITHUB_STEP_SUMMARY | |
| echo "### ${{ env.display }}" >> $GITHUB_STEP_SUMMARY | |
| echo "" >> $GITHUB_STEP_SUMMARY | |
| echo "| Kmer | Duration | (Optional) Runtime Env / OS |" >> $GITHUB_STEP_SUMMARY | |
| echo "|------|----------|-----------------------------|" >> $GITHUB_STEP_SUMMARY | |
| echo "| 11 | ${{ steps.kmer11.outputs.TIME }} | GitHub Actions / ubuntu-latest |" >> $GITHUB_STEP_SUMMARY | |
| echo "| 12 | ${{ steps.kmer12.outputs.TIME }} | GitHub Actions / ubuntu-latest |" >> $GITHUB_STEP_SUMMARY | |
| echo "| 13 | ${{ steps.kmer13.outputs.TIME }} | GitHub Actions / ubuntu-latest |" >> $GITHUB_STEP_SUMMARY | |
| echo "| 14 | ${{ steps.kmer14.outputs.TIME }} | GitHub Actions / ubuntu-latest |" >> $GITHUB_STEP_SUMMARY | |
| echo "| 15 | ${{ steps.kmer15.outputs.TIME }} | GitHub Actions / ubuntu-latest |" >> $GITHUB_STEP_SUMMARY | |
| echo "| 16 | ${{ steps.kmer16.outputs.TIME }} | GitHub Actions / ubuntu-latest |" >> $GITHUB_STEP_SUMMARY | |
| echo "| 17 | ${{ steps.kmer17.outputs.TIME }} | GitHub Actions / ubuntu-latest |" >> $GITHUB_STEP_SUMMARY |