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1. Plate-reader-regression Plate-reader-regression Public

   This is a little script I put together to do LASSO linear/logistic regression on plate reader data (mean fluorescence intensity) that includes positive and negative controls, such as when screening…

   Python

2. MCF7-ROS-RNAseq MCF7-ROS-RNAseq Public

   Forked from levin252/MCF7-ROS-RNAseq

   This is a script I used to make an R Shiny application that allows for browsing the time-course gene expression signal, and associated statistics, for an experiment where MCF-7 cells were exposed t…

   R

3. snATAC-and-scRNA-seq-plots snATAC-and-scRNA-seq-plots Public

   This repository consists of two **Jupyter Notebooks** created to document a comparison of a mouse brain snATAC-seq (single nuclei assay for transposase accessible chromatin with sequencing) data se…

   Jupyter Notebook 1 1

4. quirky-genomics-learnbot quirky-genomics-learnbot Public

   This is a project to create a 'chatbot' learning tool using a library of genomics information with a RAG-LLM and conversation history/memory- so that people can query it with questions about genomi…

   Shell