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@ComputationalProteomics

Computational Proteomics

Computational Proteomics at department of Immunotechnology, Lund University

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  1. NormalyzerDE NormalyzerDE Public

    Tools for normalization, evaluation of outliers, technical biases and batch effects and differential expression analysis.

    R 25 7

  2. proteoDeconv proteoDeconv Public

    R package for cell type deconvolution of proteomics data

    R 5

  3. OmicLoupe OmicLoupe Public

    Understanding expression across comparisons and datasets through interactive visualization

    R 2 3

  4. proteoDeconv-manuscript proteoDeconv-manuscript Public

    Code accompanying the manuscript "Considerations and Software for Successful Immune Cell Deconvolution using Proteomics Data"

    R 2

  5. ProteinRollup ProteinRollup Public

    Collection of R-based protein rollups, heavily inspired by InfernoRDN

    R

  6. ProteinRollupShiny ProteinRollupShiny Public

    Shiny server for protein rollup

    R

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