Process completed with exit code 1.

Process completed with exit code 1.

package or namespace load failed for ‘SpatialExperiment’ in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]):

package or namespace load failed for ‘GenomicFeatures’ in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]):

package or namespace load failed for 'AnnotationDbi' in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]):

package or namespace load failed for 'AnnotationDbi' in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]):

package or namespace load failed for 'SpatialExperiment' in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]):

package or namespace load failed for 'AnnotationDbi' in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]):

Process completed with exit code 1.

Label 23002 at (1) defined but not used [-Wunused-label]

Label 23001 at (1) defined but not used [-Wunused-label]

Label 23009 at (1) defined but not used [-Wunused-label]

Label 23019 at (1) defined but not used [-Wunused-label]

Label 23005 at (1) defined but not used [-Wunused-label]

Label 23003 at (1) defined but not used [-Wunused-label]

Label 23001 at (1) defined but not used [-Wunused-label]

Label 23003 at (1) defined but not used [-Wunused-label]

‘smin’ may be used uninitialized in this function [-Wmaybe-uninitialized]

Label 23005 at (1) defined but not used [-Wunused-label]

replacing previous import 'dplyr::group_rows' by 'kableExtra::group_rows' when loading 'cdsb2021scRNAseq'

replacing previous import 'cowplot::align_plots' by 'patchwork::align_plots' when loading 'cdsb2021scRNAseq'

replacing previous import 'lobstr::ast' by 'pryr::ast' when loading 'cdsb2021scRNAseq'

replacing previous import 'dplyr::where' by 'pryr::where' when loading 'cdsb2021scRNAseq'

replacing previous import 'lobstr::mem_used' by 'pryr::mem_used' when loading 'cdsb2021scRNAseq'

replacing previous import 'PCAtools::parallelPCA' by 'scran::parallelPCA' when loading 'cdsb2021scRNAseq'

replacing previous import 'edgeR::cpm' by 'SingleCellExperiment::cpm' when loading 'cdsb2021scRNAseq'

replacing previous import 'celldex::NovershternHematopoieticData' by 'SingleR::NovershternHematopoieticData' when loading 'cdsb2021scRNAseq'

replacing previous import 'celldex::DatabaseImmuneCellExpressionData' by 'SingleR::DatabaseImmuneCellExpressionData' when loading 'cdsb2021scRNAseq'

replacing previous import 'celldex::MouseRNAseqData' by 'SingleR::MouseRNAseqData' when loading 'cdsb2021scRNAseq'