up changelog

Cristianetaniguti · Jan 7, 2024 · a307b6e · a307b6e
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diff --git a/pipelines/EmpiricalReads2Map/EmpiricalReads2Map.changelog.md b/pipelines/EmpiricalReads2Map/EmpiricalReads2Map.changelog.md
@@ -1,3 +1,12 @@
+# 1.5.1
+
+* Make EmpiricalMaps for polyploids compatible with Reads2MapApp v0.0.2
+* Polyploid map quality diagnostic by resampling
+* Adapt regenotyping memory usage
+* Make BarcodeFaker task work for input files that do not finish with .fasta or .fq
+* Adapt BarcodeFaker required memory and time
+* Adapt STACKs required memory
+
 # 1.5.0
 
 * Adapt tassel and stacks tasks also for polyploids

diff --git a/tests/pipelines/EmpiricalMaps/polyploid/EmpiricalMaps_inputs.json b/tests/pipelines/EmpiricalMaps/polyploid/EmpiricalMaps_inputs.json
@@ -9,14 +9,14 @@
     "multiallelics": "false"
   },
   "Maps.max_cores": "2",
-  "Maps.run_supermassa":true,
+  "Maps.run_supermassa":false,
   "Maps.run_updog":true,
   "Maps.run_polyrad":true,
   "Maps.gatk_mchap": "FALSE",
   "Maps.vcfs_counts_source": ["vcf"],
   "Maps.vcfs_software": ["gatk"],
   "Maps.filter_noninfo": "true",
-  "Maps.vcfs": ["tests/data/polyploid/vcfs_norm/gatk_Chr04_filt_example.vcf.gz"],
+    "Maps.vcfs": ["/home/rose_lab/Reads2Map/tests/data/polyploid/vcfs_norm/gatk_Chr04_filt_example.vcf.gz"],
     "Maps.replaceADbyMissing": "TRUE",
     "Maps.global_errors":["0.05"]
 }