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1.2.0: Merge pull request #51 from DKFZ-ODCF/lsf-env-none-fix

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@vinjana vinjana released this 10 May 08:04
1.2.0
eb97a4f
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  • Minor: Updated to miniconda3:4.10.3 base container, because the previous version (4.9.2) didn't build anymore.
  • Minor: Use -env none for "lsf" cluster profile. Local environment should not be copied. This probably caused problems with the old "dkfzModules" environment profile.
  • Patch: Require Nextflow >= 22.07.1, which fixes an LSF memory request bug. Added options for per-job memory requests to "lsf" profile in nextflow.config.
  • Patch: Remove unnecessary *_BINARY variables in scripts. Binaries are fixed by Conda/containers.
  • Patch: Needed to explicitly set conda.enabled = True with newer Nextflow
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