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feat: update test
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@rushtong
rushtong committed Aug 14, 2024
1 parent 733dea5 commit 503dffa
Showing 1 changed file with 102 additions and 94 deletions.
196 changes: 102 additions & 94 deletions cypress/component/DacDatasetTable/dac_dataset_table.spec.js
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Original file line number Diff line number Diff line change
Expand Up @@ -3,97 +3,70 @@
import React from 'react';
import {mount} from 'cypress/react';
import DACDatasets from '../../../src/pages/DACDatasets';
import {DatasetService} from '../../../src/utils/DatasetService';
import {DataSet} from '../../../src/libs/ajax/DataSet';
import {Storage} from '../../../src/libs/storage';
import {BrowserRouter} from 'react-router-dom';

const sampleDataset = {
'dataSetId': 1,
'name': 'Name',
'datasetName': 'Name',
'createDate': 'Nov 22, 2022',
'datasetId': 1,
'createUserId': 1,
'updateDate': 1669148177373,
'updateUserId': 1,
'active': true,
'needsApproval': false,
'alias': 612,
'datasetIdentifier': 'DUOS-000612',
'dataUse': {
'hmbResearch': true
},
'dacId': 1,
'consentId': 'dcf14449-ff38-4fc5-8ab1-4e08f91f2521',
'translatedDataUse': 'Samples are restricted for use under the following conditions:\nData is limited for health/medical/biomedical research. [HMB]\nCommercial use is not prohibited.\nData use for methods development research irrespective of the specified data use limitations is not prohibited.\nRestrictions for use as a control set for diseases other than those defined were not specified.',
'deletable': true,
'properties': [
{
'dataSetId': 1408,
'propertyName': 'Data Type',
'propertyValue': 'test',
'propertyType': 'String'
},
{
'dataSetId': 1408,
'propertyName': '# of participants',
'propertyValue': '2',
'propertyType': 'String'
},
{
'dataSetId': 1408,
'propertyName': 'Description',
'propertyValue': 'Test Description',
'propertyType': 'String'
},
{
'dataSetId': 1408,
'propertyName': 'Phenotype/Indication',
'propertyValue': 'Indication',
'propertyType': 'String'
},
{
'dataSetId': 1408,
'propertyName': 'Dataset Name',
'propertyValue': 'Test Name',
'propertyType': 'String'
},
{
'dataSetId': 1408,
'propertyName': 'url',
'propertyValue': 'http://...',
'propertyType': 'String'
},
{
'dataSetId': 1408,
'propertyName': 'Data Depositor',
'propertyValue': 'Test User',
'propertyType': 'String'
},
{
'dataSetId': 1408,
'propertyName': 'Species',
'propertyValue': 'human',
'propertyType': 'String'
}
],
'createUserDisplayName': 'Admin',
'datasetIdentifier': 'DUOS-000649',
'deletable': false,
'datasetName': 'Test Dataset Submission V2',
'participantCount': 10,
'dataLocation': 'AnVIL Workspace',
'url': 'http://www.abcnews.com',
'dacId': 4,
'dataUse': {},
'study': {
'studyId': 1,
'name': 'xyz 123',
'description': 'test',
'publicVisibility': true,
'piName': 'Magnum PI',
'datasetIds': [
1408
],
'properties': [
{
'studyPropertyId': 110,
'studyId': 17,
'key': 'dataCustodianEmail',
'type': 'Json',
"value": []
}
'description': 'Test Dataset Submission',
'studyName': 'Test Dataset Submission V2',
'studyId': 39,
'phenotype': 'Test Dataset Submission',
'species': 'Test Dataset Submission',
'piName': 'Test Dataset Submission',
'dataSubmitterEmail': 'user@broadinstitute.org',
'dataSubmitterId': 3351,
'dataCustodianEmail': [
'grushton@broadinstitute.org'
],
'publicVisibility': true,
'dataTypes': [
'CITE-seq'
]
},
'submitter': {
'userId': 1,
'displayName': 'Admin',
'institution': {
'id': 150,
'name': 'The Broad Institute of MIT and Harvard'
}
},
'updateUser': {
'userId': 1,
'displayName': 'Admin',
'institution': {
'id': 150,
'name': 'The Broad Institute of MIT and Harvard'
}
},
'dac': {
'dacId': 4,
'dacName': 'DAC 0002'
}
};

const user = {
'userId': 1,
'displayName': 'Admin',
'institution': {
'id': 150,
'name': 'The Broad Institute of MIT and Harvard'
},
// const dacIds = user.roles?.map(r => r.dacId).filter(id => id !== undefined);
roles: [{dacId: 4}]
};

// It's necessary to wrap components that contain `Link` components
Expand All @@ -106,54 +79,89 @@ const WrappedDACDatasetsComponent = (props) => {
describe('Dac Dataset Table Component', function () {
it('Dac Dataset Table Page Loads', function () {
cy.viewport(800, 500);
mount(<DACDatasets/>);
cy.stub(Storage, 'getCurrentUser').returns(user);
cy.stub(DataSet, 'searchDatasetIndex').returns([sampleDataset]);
mount(WrappedDACDatasetsComponent({}));
cy.contains("My DAC's Datasets").should('exist');
});
it('Dataset with data use is visible on page', function () {
cy.viewport(800, 500);
const datasetWithDataUseInfo = Object.assign(
{},
sampleDataset,
{codeList: ['HMB'], translations: [{code: 'HMB', description: 'HMB'}]});
{dataUse: {
primary: [
{
code: 'HMB',
description: 'Data is limited for health/medical/biomedical research.'
}
]
}}
);
const datasets = [datasetWithDataUseInfo];
cy.stub(DatasetService, 'populateDacDatasets').returns(datasets);
mount(<DACDatasets/>);
cy.stub(DataSet, 'searchDatasetIndex').returns(datasets);
cy.stub(Storage, 'getCurrentUser').returns(user);
mount(WrappedDACDatasetsComponent({}));
cy.contains('HMB').should('exist');
});

it('Rejected dataset is visible on page', function () {
cy.viewport(800, 500);
const rejectedDataset = Object.assign(
{},
sampleDataset,
{dacApproval: false});
const datasets = [rejectedDataset];
cy.stub(DatasetService, 'populateDacDatasets').returns(datasets);
mount(<DACDatasets/>);
cy.stub(DataSet, 'searchDatasetIndex').returns(datasets);
cy.stub(Storage, 'getCurrentUser').returns(user);
mount(WrappedDACDatasetsComponent({}));
cy.contains('REJECTED').should('exist');
});

it('Accepted dataset is visible on page', function () {
cy.viewport(800, 500);
const approvedDataset = Object.assign(
{},
sampleDataset,
{dacApproval: true});
const datasets = [approvedDataset];
cy.stub(DatasetService, 'populateDacDatasets').returns(datasets);
cy.stub(DataSet, 'searchDatasetIndex').returns(datasets);
cy.stub(Storage, 'getCurrentUser').returns(user);
mount(WrappedDACDatasetsComponent({}));
cy.contains('ACCEPTED').should('exist');
});

it('Datasets filter on data use', function () {
cy.viewport(800, 500);
const hmbDataset = Object.assign(
{},
sampleDataset,
{dataSetId: 1, codeList: ['HMB'], translations: [{code: 'HMB', description: 'HMB'}]});
{dataUse: {
primary: [
{
code: 'HMB',
description: 'Data is limited for health/medical/biomedical research.'
}
]
}}
);
const gruDataset = Object.assign(
{},
sampleDataset,
{dataSetId: 2, dataUse: {generalUse: true}, codeList: ['GRU'], translations: [{code: 'GRU', description: 'GRU'}]});
{
datasetId: 2,
dataUse: {
primary: [
{
code: 'GRU',
description: 'Data is available for general research use.'
}
]
}}
);
const datasets = [hmbDataset, gruDataset];
cy.stub(DatasetService, 'populateDacDatasets').returns(datasets);
cy.stub(DataSet, 'searchDatasetIndex').returns(datasets);
cy.stub(Storage, 'getCurrentUser').returns(user);
mount(WrappedDACDatasetsComponent({}));
cy.contains('HMB').should('exist');
cy.contains('GRU').should('exist');
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