updating changelogs

.scala-build/.bloop/terra-docker_bd2c96d2de-test.json

@@ -0,0 +1 @@
+{"version":"1.4.0","project":{"name":"terra-docker_bd2c96d2de-test","directory":"/Users/mcnatt/broad/terra-docker/.scala-build","workspaceDir":"/Users/mcnatt/broad/terra-docker","sources":[],"dependencies":["terra-docker_bd2c96d2de"],"classpath":["/Users/mcnatt/Library/Caches/Coursier/v1/https/repo1.maven.org/maven2/org/scala-lang/scala3-library_3/3.3.0/scala3-library_3-3.3.0.jar","/Users/mcnatt/Library/Caches/Coursier/v1/https/repo1.maven.org/maven2/org/scala-lang/scala-library/2.13.10/scala-library-2.13.10.jar","/Users/mcnatt/broad/terra-docker/.scala-build/terra-docker_bd2c96d2de/classes/main","/Users/mcnatt/Library/Caches/Coursier/v1/https/repo1.maven.org/maven2/com/sourcegraph/semanticdb-javac/0.7.4/semanticdb-javac-0.7.4.jar"],"out":"/Users/mcnatt/broad/terra-docker/.scala-build/.bloop/terra-docker_bd2c96d2de-test","classesDir":"/Users/mcnatt/broad/terra-docker/.scala-build/terra-docker_bd2c96d2de/classes/test","scala":{"organization":"org.scala-lang","name":"scala-compiler","version":"3.3.0","options":["-Xsemanticdb","-sourceroot","/Users/mcnatt/broad/terra-docker","-release","17"],"jars":["/Users/mcnatt/Library/Caches/Coursier/v1/https/repo1.maven.org/maven2/org/scala-lang/scala3-compiler_3/3.3.0/scala3-compiler_3-3.3.0.jar","/Users/mcnatt/Library/Caches/Coursier/v1/https/repo1.maven.org/maven2/org/scala-lang/scala3-interfaces/3.3.0/scala3-interfaces-3.3.0.jar","/Users/mcnatt/Library/Caches/Coursier/v1/https/repo1.maven.org/maven2/org/scala-lang/scala3-library_3/3.3.0/scala3-library_3-3.3.0.jar","/Users/mcnatt/Library/Caches/Coursier/v1/https/repo1.maven.org/maven2/org/scala-lang/tasty-core_3/3.3.0/tasty-core_3-3.3.0.jar","/Users/mcnatt/Library/Caches/Coursier/v1/https/repo1.maven.org/maven2/org/scala-lang/modules/scala-asm/9.4.0-scala-1/scala-asm-9.4.0-scala-1.jar","/Users/mcnatt/Library/Caches/Coursier/v1/https/repo1.maven.org/maven2/org/scala-sbt/compiler-interface/1.3.5/compiler-interface-1.3.5.jar","/Users/mcnatt/Library/Caches/Coursier/v1/https/repo1.maven.org/maven2/org/jline/jline-reader/3.19.0/jline-reader-3.19.0.jar","/Users/mcnatt/Library/Caches/Coursier/v1/https/repo1.maven.org/maven2/org/jline/jline-terminal/3.19.0/jline-terminal-3.19.0.jar","/Users/mcnatt/Library/Caches/Coursier/v1/https/repo1.maven.org/maven2/org/jline/jline-terminal-jna/3.19.0/jline-terminal-jna-3.19.0.jar","/Users/mcnatt/Library/Caches/Coursier/v1/https/repo1.maven.org/maven2/org/scala-lang/scala-library/2.13.10/scala-library-2.13.10.jar","/Users/mcnatt/Library/Caches/Coursier/v1/https/repo1.maven.org/maven2/com/google/protobuf/protobuf-java/3.7.0/protobuf-java-3.7.0.jar","/Users/mcnatt/Library/Caches/Coursier/v1/https/repo1.maven.org/maven2/org/scala-sbt/util-interface/1.3.0/util-interface-1.3.0.jar","/Users/mcnatt/Library/Caches/Coursier/v1/https/repo1.maven.org/maven2/net/java/dev/jna/jna/5.3.1/jna-5.3.1.jar"]},"java":{"options":["--release","17","-Xplugin:semanticdb -sourceroot:/Users/mcnatt/broad/terra-docker -targetroot:javac-classes-directory","-J--add-exports","-Jjdk.compiler/com.sun.tools.javac.api=ALL-UNNAMED","-J--add-exports","-Jjdk.compiler/com.sun.tools.javac.code=ALL-UNNAMED","-J--add-exports","-Jjdk.compiler/com.sun.tools.javac.model=ALL-UNNAMED","-J--add-exports","-Jjdk.compiler/com.sun.tools.javac.tree=ALL-UNNAMED","-J--add-exports","-Jjdk.compiler/com.sun.tools.javac.util=ALL-UNNAMED"]},"test":{"frameworks":[{"names":["com.novocode.junit.JUnitFramework"]},{"names":["org.scalatest.tools.Framework","org.scalatest.tools.ScalaTestFramework"]},{"names":["org.scalacheck.ScalaCheckFramework"]},{"names":["org.specs.runner.SpecsFramework","org.specs2.runner.Specs2Framework","org.specs2.runner.SpecsFramework"]},{"names":["utest.runner.Framework"]},{"names":["munit.Framework"]}],"options":{"excludes":[],"arguments":[]}},"platform":{"name":"jvm","config":{"options":[]},"mainClass":[]},"resolution":{"modules":[{"organization":"org.scala-lang","name":"scala3-library_3","version":"3.3.0","artifacts":[{"name":"scala3-library_3","path":"/Users/mcnatt/Library/Caches/Coursier/v1/https/repo1.maven.org/maven2/org/scala-lang/scala3-library_3/3.3.0/scala3-library_3-3.3.0.jar"},{"name":"scala3-library_3","classifier":"sources","path":"/Users/mcnatt/Library/Caches/Coursier/v1/https/repo1.maven.org/maven2/org/scala-lang/scala3-library_3/3.3.0/scala3-library_3-3.3.0-sources.jar"}]},{"organization":"org.scala-lang","name":"scala-library","version":"2.13.10","artifacts":[{"name":"scala-library","path":"/Users/mcnatt/Library/Caches/Coursier/v1/https/repo1.maven.org/maven2/org/scala-lang/scala-library/2.13.10/scala-library-2.13.10.jar"},{"name":"scala-library","classifier":"sources","path":"/Users/mcnatt/Library/Caches/Coursier/v1/https/repo1.maven.org/maven2/org/scala-lang/scala-library/2.13.10/scala-library-2.13.10-sources.jar"}]}]},"tags":["test"]}}

.scala-build/.bloop/terra-docker_bd2c96d2de.json

@@ -0,0 +1 @@
+{"version":"1.4.0","project":{"name":"terra-docker_bd2c96d2de","directory":"/Users/mcnatt/broad/terra-docker/.scala-build","workspaceDir":"/Users/mcnatt/broad/terra-docker","sources":["/Users/mcnatt/broad/terra-docker/.scala-build/terra-docker_bd2c96d2de/src_generated/main/updateVersions.scala"],"dependencies":[],"classpath":["/Users/mcnatt/Library/Caches/Coursier/v1/https/repo1.maven.org/maven2/org/scala-lang/scala3-library_3/3.3.0/scala3-library_3-3.3.0.jar","/Users/mcnatt/Library/Caches/Coursier/v1/https/repo1.maven.org/maven2/org/scala-lang/scala-library/2.13.10/scala-library-2.13.10.jar","/Users/mcnatt/Library/Caches/Coursier/v1/https/repo1.maven.org/maven2/com/sourcegraph/semanticdb-javac/0.7.4/semanticdb-javac-0.7.4.jar"],"out":"/Users/mcnatt/broad/terra-docker/.scala-build/.bloop/terra-docker_bd2c96d2de","classesDir":"/Users/mcnatt/broad/terra-docker/.scala-build/terra-docker_bd2c96d2de/classes/main","scala":{"organization":"org.scala-lang","name":"scala-compiler","version":"3.3.0","options":["-Xsemanticdb","-sourceroot","/Users/mcnatt/broad/terra-docker","-release","17"],"jars":["/Users/mcnatt/Library/Caches/Coursier/v1/https/repo1.maven.org/maven2/org/scala-lang/scala3-compiler_3/3.3.0/scala3-compiler_3-3.3.0.jar","/Users/mcnatt/Library/Caches/Coursier/v1/https/repo1.maven.org/maven2/org/scala-lang/scala3-interfaces/3.3.0/scala3-interfaces-3.3.0.jar","/Users/mcnatt/Library/Caches/Coursier/v1/https/repo1.maven.org/maven2/org/scala-lang/scala3-library_3/3.3.0/scala3-library_3-3.3.0.jar","/Users/mcnatt/Library/Caches/Coursier/v1/https/repo1.maven.org/maven2/org/scala-lang/tasty-core_3/3.3.0/tasty-core_3-3.3.0.jar","/Users/mcnatt/Library/Caches/Coursier/v1/https/repo1.maven.org/maven2/org/scala-lang/modules/scala-asm/9.4.0-scala-1/scala-asm-9.4.0-scala-1.jar","/Users/mcnatt/Library/Caches/Coursier/v1/https/repo1.maven.org/maven2/org/scala-sbt/compiler-interface/1.3.5/compiler-interface-1.3.5.jar","/Users/mcnatt/Library/Caches/Coursier/v1/https/repo1.maven.org/maven2/org/jline/jline-reader/3.19.0/jline-reader-3.19.0.jar","/Users/mcnatt/Library/Caches/Coursier/v1/https/repo1.maven.org/maven2/org/jline/jline-terminal/3.19.0/jline-terminal-3.19.0.jar","/Users/mcnatt/Library/Caches/Coursier/v1/https/repo1.maven.org/maven2/org/jline/jline-terminal-jna/3.19.0/jline-terminal-jna-3.19.0.jar","/Users/mcnatt/Library/Caches/Coursier/v1/https/repo1.maven.org/maven2/org/scala-lang/scala-library/2.13.10/scala-library-2.13.10.jar","/Users/mcnatt/Library/Caches/Coursier/v1/https/repo1.maven.org/maven2/com/google/protobuf/protobuf-java/3.7.0/protobuf-java-3.7.0.jar","/Users/mcnatt/Library/Caches/Coursier/v1/https/repo1.maven.org/maven2/org/scala-sbt/util-interface/1.3.0/util-interface-1.3.0.jar","/Users/mcnatt/Library/Caches/Coursier/v1/https/repo1.maven.org/maven2/net/java/dev/jna/jna/5.3.1/jna-5.3.1.jar"]},"java":{"options":["--release","17","-Xplugin:semanticdb -sourceroot:/Users/mcnatt/broad/terra-docker -targetroot:javac-classes-directory","-J--add-exports","-Jjdk.compiler/com.sun.tools.javac.api=ALL-UNNAMED","-J--add-exports","-Jjdk.compiler/com.sun.tools.javac.code=ALL-UNNAMED","-J--add-exports","-Jjdk.compiler/com.sun.tools.javac.model=ALL-UNNAMED","-J--add-exports","-Jjdk.compiler/com.sun.tools.javac.tree=ALL-UNNAMED","-J--add-exports","-Jjdk.compiler/com.sun.tools.javac.util=ALL-UNNAMED"]},"platform":{"name":"jvm","config":{"options":[]},"mainClass":[]},"resolution":{"modules":[{"organization":"org.scala-lang","name":"scala3-library_3","version":"3.3.0","artifacts":[{"name":"scala3-library_3","path":"/Users/mcnatt/Library/Caches/Coursier/v1/https/repo1.maven.org/maven2/org/scala-lang/scala3-library_3/3.3.0/scala3-library_3-3.3.0.jar"},{"name":"scala3-library_3","classifier":"sources","path":"/Users/mcnatt/Library/Caches/Coursier/v1/https/repo1.maven.org/maven2/org/scala-lang/scala3-library_3/3.3.0/scala3-library_3-3.3.0-sources.jar"}]},{"organization":"org.scala-lang","name":"scala-library","version":"2.13.10","artifacts":[{"name":"scala-library","path":"/Users/mcnatt/Library/Caches/Coursier/v1/https/repo1.maven.org/maven2/org/scala-lang/scala-library/2.13.10/scala-library-2.13.10.jar"},{"name":"scala-library","classifier":"sources","path":"/Users/mcnatt/Library/Caches/Coursier/v1/https/repo1.maven.org/maven2/org/scala-lang/scala-library/2.13.10/scala-library-2.13.10-sources.jar"}]}]},"tags":["library"]}}

.scala-build/terra-docker_bd2c96d2de/src_generated/main/updateVersions.scala

@@ -0,0 +1,209 @@
+
+
+
+
+final class updateVersions$_ {
+def args = updateVersions_sc.args$
+def scriptPath = """updateVersions.sc"""
+/*<script>*/
+/**
+* This script is written in Scala 2.13+
+* Run it with `ammonite for Scala 2.13+`
+*/
+
+val workbenchUtil2 = "0.10-c3ef6b80-SNAP"
+
+val circeVersion = "0.14.0"
+interp.load.ivy(
+  "co.fs2" %% "fs2-io" % "2.5.10",
+  "io.circe" %% "circe-core" % circeVersion,
+  "io.circe" %% "circe-parser" % circeVersion,
+  "io.circe" %% "circe-generic" % circeVersion,
+  "io.circe" %% "circe-optics" % circeVersion
+)
+
+@
+
+import cats.effect.IO
+import java.nio.file.Paths
+import java.nio.file.Path
+
+import io.circe.parser._
+import io.circe.Printer
+import io.circe.Json
+import io.circe.syntax._
+import io.circe.optics.JsonPath._
+import io.circe.generic.semiauto._
+import sys.process._
+import scala.concurrent.ExecutionContext.global
+import cats.effect.Blocker
+import fs2.{io, text}
+import java.time.Instant
+import cats.implicits._
+
+implicit val cs = IO.contextShift(global)
+val blocker = Blocker.liftExecutionContext(global)
+
+// Example: oldVersion 1.0.4, newVersion 1.0.5
+private def newVersion(oldVersion: String, bumpMajorVersion: Boolean): String = {
+  val splited = oldVersion.split("\\.")
+  if(bumpMajorVersion)
+    s"${splited(0).toInt + 1}.0.0"
+  else
+    s"${splited(0)}.${splited(1)}.${splited(2).toInt + 1}"
+}
+
+def modifyVersion(bumpMajorVersion: Boolean): Json => Json =
+  root.version.string.modify {
+    s =>
+      newVersion(s, bumpMajorVersion)
+  }
+
+def modifyImageData(imagesToUpdate: List[String], bumpMajorVersion: Boolean): Json => Json =
+  root.image_data.arr.modify {
+    listOfImageData =>
+      listOfImageData.map {
+        image =>
+          val imageName = image.hcursor.downField("name").as[String].fold(e => throw e, identity)
+          if(imagesToUpdate.contains(imageName))
+            modifyVersion(bumpMajorVersion)(image)
+          else image
+      }
+  }
+
+/**
+ * In repo root dir, run `amm ./updateVersions.sc terra-jupyter-base 'update notebook to 6.1.1'`
+ * @param updatedImage e.g. "terra-jupyter-base"
+ */
+@main
+def main(updatedImage: String, updatedImageReleaseNote: String, bumpMajorVersion: Boolean = false): Unit = {
+  val imagesToUpdate: List[String] = updatedImage match {
+    case "terra-jupyter-base" => List(
+      "terra-jupyter-bioconductor",
+      "terra-jupyter-hail",
+      "terra-jupyter-base",
+      "terra-jupyter-python",
+      "terra-jupyter-r",
+      "terra-jupyter-gatk",
+      "terra-jupyter-aou",
+    )
+    case "terra-jupyter-r" => List(
+      "terra-jupyter-r",
+      "terra-jupyter-bioconductor",
+      "terra-jupyter-gatk",
+      "terra-jupyter-aou",
+    )
+    case "terra-jupyter-python" => List(
+      "terra-jupyter-python",
+      "terra-jupyter-hail",
+      "terra-jupyter-gatk",
+      "terra-jupyter-aou",
+    )
+    case "terra-jupyter-hail" => List(
+      "terra-jupyter-hail"
+    )
+    case "terra-jupyter-gatk" => List(
+      "terra-jupyter-gatk"
+    )
+    case "terra-jupyter-aou" => List(
+      "terra-jupyter-aou"
+    )
+    case updatedImage =>
+      throw new Exception(s"${updatedImage} is not supported yet. Please update the script to support the image")
+  }
+
+  val res = for {
+    configFileRawJson <- (io.file.readAll[IO](Paths.get("./config/conf.json"), blocker, 4096).through(text.utf8Decode)).compile.string
+    config <- IO.fromEither(parse(configFileRawJson))
+    newConfig = modifyImageData(imagesToUpdate, bumpMajorVersion)(config)
+    _ <- (fs2.Stream.emit(newConfig.asJson.printWith(Printer.spaces4)).covary[IO]
+      .through(text.utf8Encode)
+      .through(io.file.writeAll(Paths.get("./config/conf.json"), blocker))).compile.drain
+
+    // Update updatedImage's changelog
+    updatedImageChangeLogFile = Paths.get(s"${updatedImage}/CHANGELOG.md")
+    updatedImageNewVersion <- updateChangeLogFile(
+      updatedImage,
+      s"""- ${updatedImageReleaseNote}""".stripMargin,
+      updatedImageChangeLogFile,
+      bumpMajorVersion
+    )
+    // Update `Dockerfile` and `CHANGELOG.md`
+    _ <- imagesToUpdate.filterNot(_.contains(updatedImage)).traverse {
+      image =>
+        val dockerFileToUpdate = Paths.get(s"${image}/Dockerfile")
+        val changelogFile = Paths.get(s"./${image}/CHANGELOG.md")
+        for {
+          lines <- (io.file.readAll[IO] (dockerFileToUpdate, blocker, 4096)
+                    .through(text.utf8Decode)
+                    .through(text.lines)).compile.toList
+          newLines = lines.zipWithIndex.map {
+            lineWithIndex =>
+              val s = lineWithIndex._1
+              if(s.contains("FROM") && !s.contains("AS")) {
+                val firstSplit = s.split(":")
+                val imageName = firstSplit(0).split("\\/")(2)
+                if(imagesToUpdate.contains(imageName)) {
+                  s"${firstSplit(0)}:${newVersion(firstSplit(1), bumpMajorVersion)}\n"
+                } else s"${s}\n"
+              } else if(s.contains(" AS ") && imagesToUpdate.contains("terra-jupyter-python")) {
+                val firstSplit = s.split(":")
+                val secondSplit = firstSplit(1).split(" ")
+                s"${firstSplit(0)}:${newVersion(secondSplit(0), bumpMajorVersion)} AS python\n"
+              } else if(lineWithIndex._2 == lines.length - 1)
+                s
+              else s"${s}\n"
+          }
+          _ <- (fs2.Stream.emits(newLines).covary[IO].through(text.utf8Encode)
+            .through(io.file.writeAll(dockerFileToUpdate, blocker))).compile.drain
+
+          _ <- updateChangeLogFile(image, s"- Update `${updatedImage}` to `${updatedImageNewVersion}`\n  - ${updatedImageReleaseNote}", changelogFile, bumpMajorVersion)
+        } yield ()
+    }
+  } yield ()
+
+  res.unsafeRunSync
+}
+
+// returns the new version String of this file
+def updateChangeLogFile(image: String, msg: String, path: Path, bumpMajorVersion: Boolean): IO[String] = for {
+  originalFileContent <- (io.file.readAll[IO] (path, blocker, 4096)
+                                .through(text.utf8Decode)).compile.string
+  firstLine = originalFileContent.split("\n")(0)
+  newV = newVersion(firstLine.split(" ")(1), bumpMajorVersion)
+  newFileContent =
+  s"""## ${newV} - ${Instant.now()}
+     |
+     |${msg}
+     |
+     |Image URL: `us.gcr.io/broad-dsp-gcr-public/${image}:${newV}`
+     |
+     |${originalFileContent}""".stripMargin
+  _ <- (fs2.Stream.emit(newFileContent).covary[IO].through(text.utf8Encode)
+    .through(io.file.writeAll(path, blocker))).compile.drain
+} yield newV
+
+/*</script>*/ /*<generated>*/
+/*</generated>*/
+}
+
+object updateVersions_sc {
+  private var args$opt0 = Option.empty[Array[String]]
+  def args$set(args: Array[String]): Unit = {
+    args$opt0 = Some(args)
+  }
+  def args$opt: Option[Array[String]] = args$opt0
+  def args$: Array[String] = args$opt.getOrElse {
+    sys.error("No arguments passed to this script")
+  }
+
+  lazy val script = new updateVersions$_
+
+  def main(args: Array[String]): Unit = {
+    args$set(args)
+    script.hashCode() // hashCode to clear scalac warning about pure expression in statement position
+  }
+}
+
+export updateVersions_sc.script as updateVersions
+

terra-jupyter-aou/CHANGELOG.md

@@ -1,3 +1,12 @@
+## 2.2.8 - 2022-04-23
+- Update `terra-jupyter-gatk` to `2.3.5`
+  - Update `terra-jupyter-r` to `2.2.4`
+  - Update `terra-jupyter-python` to `1.1.5`
+    - Update `terra-jupyter-base` to `1.1.4`
+      - Change the welder user id
+
+Image URL: `us.gcr.io/broad-dsp-gcr-public/terra-jupyter-aou:2.2.8`
+
 ## 2.2.7 - 2023-11-01
 - Pin `gnomad` to `0.6.4`
   - See https://github.com/broadinstitute/gnomad_methods/releases for details

terra-jupyter-aou/Dockerfile

@@ -1,4 +1,4 @@
-FROM us.gcr.io/broad-dsp-gcr-public/terra-jupyter-gatk:2.3.4
+FROM us.gcr.io/broad-dsp-gcr-public/terra-jupyter-gatk:2.3.5
 
 USER root
 

terra-jupyter-base/CHANGELOG.md

@@ -1,3 +1,8 @@
+## 1.1.4 - 2024-4-23
+- Change the welder user id
+
+Image URL: `us.gcr.io/broad-dsp-gcr-public/terra-jupyter-base:1.1.4`
+
 ## 1.1.3 - 2023-10-03
 - Downgrade notebook to `6.5.4` and jupyterlab-server to `2.23.0`
 

terra-jupyter-bioconductor/CHANGELOG.md

@@ -1,3 +1,10 @@
+## 2.2.4 - 2024-04-23
+- Update `terra-jupyter-r` to `2.2.4`
+  - Update `terra-jupyter-base` to `1.1.4`
+    - Change welder user id
+
+Image URL: `us.gcr.io/broad-dsp-gcr-public/terra-jupyter-bioconductor:2.2.4`
+
 ## 2.2.3 - 2023-10-03
 - Update `terra-jupyter-r` to `2.2.3`
     - Update `terra-jupyter-base` to `1.1.3`

terra-jupyter-bioconductor/Dockerfile

@@ -1 +1 @@
-FROM us.gcr.io/broad-dsp-gcr-public/terra-jupyter-r:2.2.3
+FROM us.gcr.io/broad-dsp-gcr-public/terra-jupyter-r:2.2.4

terra-jupyter-gatk/CHANGELOG.md

@@ -1,3 +1,9 @@
+## 2.3.5 - 2024-04-23
+- Update `terra-jupyter-r` to `2.2.4`
+- Update `terra-jupyter-python` to `1.1.5`
+  - Update `terra-jupyter-base` to `1.1.4`
+    - Change the welder user id
+
 ## 2.3.4 - 2023-10-06
 - Update `terra-jupyter-python` to `1.1.4`
   - Downgrade pytz to `2023.3`

terra-jupyter-gatk/Dockerfile

@@ -1,6 +1,6 @@
-FROM us.gcr.io/broad-dsp-gcr-public/terra-jupyter-python:1.1.4 AS python
+FROM us.gcr.io/broad-dsp-gcr-public/terra-jupyter-python:1.1.5 AS python
 
-FROM us.gcr.io/broad-dsp-gcr-public/terra-jupyter-r:2.2.3
+FROM us.gcr.io/broad-dsp-gcr-public/terra-jupyter-r:2.2.4
 
 USER root
 

terra-jupyter-hail/CHANGELOG.md

@@ -1,3 +1,10 @@
+## 1.1.8 - 2024-04-23
+- Update `terra-jupyter-python` to `1.1.5`
+  - Update `terra-jupyter-base` to `1.1.4`
+    - Change the welder user id
+
+Image URL: `us.gcr.io/broad-dsp-gcr-public/terra-jupyter-hail:1.1.8`
+
 ## 1.1.7 - 2023-11-01
 - Pin `gnomad` to `0.6.4`
   - See https://github.com/broadinstitute/gnomad_methods/releases for details

terra-jupyter-hail/Dockerfile

@@ -1,4 +1,4 @@
-FROM us.gcr.io/broad-dsp-gcr-public/terra-jupyter-python:1.1.4
+FROM us.gcr.io/broad-dsp-gcr-public/terra-jupyter-python:1.1.5
 
 USER root
 

terra-jupyter-python/CHANGELOG.md

@@ -1,3 +1,9 @@
+## 1.1.5 - 2024-04-23
+- Update `terra-jupyter-base` to `1.1.4`
+  - Change the welder user id
+
+Image URL: `us.gcr.io/broad-dsp-gcr-public/terra-jupyter-python:1.1.5`
+
 ## 1.1.4 - 2023-10-06
 - Downgrade pytz to `2023.3`
 

terra-jupyter-python/Dockerfile

@@ -1,4 +1,4 @@
-FROM us.gcr.io/broad-dsp-gcr-public/terra-jupyter-base:1.1.3
+FROM us.gcr.io/broad-dsp-gcr-public/terra-jupyter-base:1.1.4
 
 USER root
 # This makes it so pip runs as root, not the user.

terra-jupyter-r/CHANGELOG.md

@@ -1,4 +1,10 @@
-## 1.1.3 - 2023-10-03
+## 2.2.4 - 2024-04-23
+- Update `terra-jupyter-base` to `1.1.4`
+  - Change the welder user id
+
+Image URL: `us.gcr.io/broad-dsp-gcr-public/terra-jupyter-r:2.2.4`
+
+## 2.2.3 - 2023-10-03
 - Update `terra-jupyter-base` to `1.1.3`
    - Downgrade notebook to `6.5.4` and jupyterlab-server to `2.23.0`
 

terra-jupyter-r/Dockerfile

@@ -1,4 +1,4 @@
-FROM us.gcr.io/broad-dsp-gcr-public/terra-jupyter-base:1.1.3
+FROM us.gcr.io/broad-dsp-gcr-public/terra-jupyter-base:1.1.4
 
 USER root