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Adds MAM4xx: Aerosol wet scavenging interface #2848

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odiazib
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@odiazib odiazib commented May 23, 2024

We are adding the emaxx-mam4xx interface for the aerosol wet scavenging process (mam4_wetscav). This interface computes aerdepwetis and aerdepwetcw; these variables are used to calculate surface fluxes required by the land model. Cloud-borne and interstitial aerosol mixing ratios are also updated by this routine. Finally, this routine calculates wet aerosol diameter, aerosol particle diameter, aerosol water mixing ratio, and wet aerosol density.

This interface invokes the mam4xx aero_model_wetdep routine. This routine is part of mam4xx and invokes the modal_aero_calcsize_sub and water_modal_aero_water_uptake_dr routines, as well as the core of the wet deposition routines. The inputs and outputs for this routine are presented next.

Inputs:

Variable Description Units
cldfrac_liq Sloud fraction fraction
precip_total_tend Stratiform rain production rate kg/kg/s
nevapr Evaporation from stratiform rain kg/kg/s

In/Out:

Variable Description Units
wetdep_hydrophilic_bc Wet deposition of hydrophilic black carbon kg/m2/s
drydep_hydrophilic_bc Dry deposition of hydrophilic black carbon kg/m2/s
wetdep_hydrophilic_oc Wet deposition of hydrophilic organic carbon kg/m2/s
drydep_hydrophilic_oc Dry deposition of hydrophilic organic carbon kg/m2/s
wetdep_dust_bin1 Wet deposition of dust (bin1) kg/m2/s
wetdep_dust_bin2 Wet deposition of dust (bin2) kg/m2/s
wetdep_dust_bin3 Wet deposition of dust (bin3) kg/m2/s
wetdep_dust_bin4 Wet deposition of dust (bin4) kg/m2/s
Interstitial and cloud borne aerosols tendencies kg/kg/s

Output:

Variable Description Units
dgncur_a Aerosol dry particle diameter m
qaerwat Aerosol water kg/kg
wetdens Wet aerosol density kg/m3
dgnumwet Wet aerosol diameter m
aerdepwetis aerosol wet deposition (interstitial) kg/m2/s
aerdepwetcw aerosol wet deposition (cloud water) kg/m2/s

Testing

We have included four SCREAM standalone tests, one for a single process and 3 for multiple processes. These tests are running correctly on both CPUs and GPUs, as reported by the autotester (AT). Note that the baseline tests for these are failing because we have not created these baselines yet.
wetscav process is added as an EAMxx process with the ability to turn it on/off using the label mam4_wetscav in the namelist_scream.xml file. The atmchange command to invoke this process in a CIME simulation is:

./atmchange physics::atm_procs_list="mac_aero_mic,mam4_wetscav,rrtmgp"

To run a CIME simulation, we have created a test modifier mam4xx-wetscav:

cd cime/scripts
./create_test SMS_D_P32x1_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.<machine>_<compiler>.scream-mam4xx-wetscav -t <test id> -p <project id> 

Where,
<machine> is the machine name
<compiler> is the compiler to use on the machine
<test id > is a unique string test identifier
<project id> is the allocation project to charge

Here are some plots showing changes in burdens of BC and Dust from the simulations with wet scavenging turned on along with other processes:
ne4pg2 grid:
image
ne30pg2 grid:
image

Validation in mam4xx.

We have created a validation test for aero_model_wetdep that utilizes data generated by E3SM v2 and using Skywalker. Additionally, all subroutines within aero_model_wetdep were verified using data generated by E3SM v2 and using Skywalker.

Indices of species in MAM4xx

Indices are same in MAM4xx as of Fortran MAM4 except that MAM4xx uses zero-based indexing:

    0  Q                        
    1  CLDLIQ                   
    2  CLDICE                   
    3  NUMLIQ                   
    4  NUMICE                   
    5  RAINQM                   
    6  SNOWQM                   
    7  NUMRAI                   
    8  NUMSNO                   
    9  O3                       
   10  H2O2                     
   11  H2SO4                    
   12  SO2                      
   13  DMS                      
   14  SOAG                     
   15  so4_a1            so4_c1 
   16  pom_a1            pom_c1 
   17  soa_a1            soa_c1 
   18  bc_a1             bc_c1  
   19  dst_a1            dst_c1 
   20  ncl_a1            ncl_c1 
   21  mom_a1            mom_c1 
   22  num_a1            num_c1 
   23  so4_a2            so4_c2 
   24  soa_a2            soa_c2 
   25  ncl_a2            ncl_c2 
   26  mom_a2            mom_c2 
   27  num_a2            num_c2 
   28  dst_a3            dst_c3 
   29  ncl_a3            ncl_c3 
   30  so4_a3            so4_c3 
   31  bc_a3             bc_c3  
   32  pom_a3            pom_c3 
   33  soa_a3            soa_c3 
   34  mom_a3            mom_c3 
   35  num_a3            num_c3 
   36  pom_a4            pom_c4 
   37  bc_a4             bc_c4  
   38  mom_a4            mom_c4 
   39  num_a4            num_c4

Standalone Test Timings (Compy):

PEM                 =  39.79 sec*proc (72 tests)
bfbhash             =   4.97 sec*proc (1 test)
check               =   5.88 sec*proc (1 test)
cld                 = 14049.52 sec*proc (95 tests)
cld_fraction        =   4.84 sec*proc (1 test)
cosp                =  61.28 sec*proc (4 tests)
diagnostics         = 498.98 sec*proc (4 tests)
dp                  = 1429.21 sec*proc (7 tests)
driver              = 16803.81 sec*proc (106 tests)
dynamics            = 10446.91 sec*proc (60 tests)
fail                =   4.24 sec*proc (1 test)
mam4_aci            = 2362.73 sec*proc (35 tests)
mam4_optics         = 2764.64 sec*proc (21 tests)
**mam4_wetscav        = 3406.18 sec*proc (28 tests)**
nudging             = 716.41 sec*proc (4 tests)
p3                  = 14561.50 sec*proc (113 tests)
pg2                 = 495.18 sec*proc (10 tests)
physics             = 16567.19 sec*proc (181 tests)
rrtmgp              = 13931.98 sec*proc (97 tests)
shoc                = 14443.18 sec*proc (116 tests)
spa                 = 4137.52 sec*proc (37 tests)
surface_coupling    =  54.13 sec*proc (4 tests)
tms                 = 1923.72 sec*proc (14 tests)

Important notes:

1.     TODO: We need to connect the output from this process to land aerosol fluxes. We will do that in a follow-up PR (see issue #2888 ).

@odiazib odiazib added AT: RETEST EAGLES Work related to the EAGLES aerosol project and removed AT: WIP labels May 23, 2024
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Status Flag 'Pull Request AutoTester' - User Requested Retest - Label AT: RETEST will be reset after testing.

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Status Flag 'Pre-Test Inspection' - - This Pull Request Requires Inspection... The code must be inspected by a member of the Team before Testing/Merging
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Status Flag 'Pull Request AutoTester' - User Requested Retest - Label AT: RETEST will be reset after testing.

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Status Flag 'Pull Request AutoTester' - User Requested Retest - Label AT: RETEST will be reset after testing.

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Status Flag 'Pre-Test Inspection' - - This Pull Request Requires Inspection... The code must be inspected by a member of the Team before Testing/Merging
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Status Flag 'Pull Request AutoTester' - User Requested Retest - Label AT: RETEST will be reset after testing.

@odiazib odiazib added AT: WIP and removed AT: WIP labels May 27, 2024
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@odiazib , is this a WIP PR?

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odiazib commented May 28, 2024

@odiazib , is this a WIP PR?

@susburrows . Yes, it is. I removed the label WIP so I can run the auto tester. I will check that tests are passing in weaver/mappy. Then, this PR will be ready for review.

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@odiazib , is this a WIP PR?

@susburrows . Yes, it is. I removed the label WIP so I can run the auto tester. I will check that tests are passing in weaver/mappy. Then, this PR will be ready for review.

Sounds good! Please send me an email when it's ready for me to look at.

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Status Flag 'Pre-Test Inspection' - SUCCESS: The last commit to this Pull Request has been INSPECTED by label AT: PRE-TEST INSPECTED! Autotester is Removing Label; this inspection will remain valid until a new commit to source branch is performed.

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Status Flag 'Pull Request AutoTester' - Testing Jenkins Projects:

Pull Request Auto Testing STARTING (click to expand)

Build Information

Test Name: SCREAM_PullRequest_Autotester_Mappy

  • Build Num: 5477
  • Status: STARTED

Jenkins Parameters

Parameter Name Value
PR_LABELS AT: RETEST;EAGLES
PULLREQUESTNUM 2848
SCREAM_SOURCE_REPO https://github.com/eagles-project/scream
SCREAM_SOURCE_SHA e17b6c5
SCREAM_TARGET_BRANCH master
SCREAM_TARGET_REPO https://github.com/E3SM-Project/scream
SCREAM_TARGET_SHA b6131da
TEST_REPO_ALIAS SCREAM

Build Information

Test Name: SCREAM_PullRequest_Autotester_Weaver

  • Build Num: 5754
  • Status: STARTED

Jenkins Parameters

Parameter Name Value
PR_LABELS AT: RETEST;EAGLES
PULLREQUESTNUM 2848
SCREAM_SOURCE_REPO https://github.com/eagles-project/scream
SCREAM_SOURCE_SHA e17b6c5
SCREAM_TARGET_BRANCH master
SCREAM_TARGET_REPO https://github.com/E3SM-Project/scream
SCREAM_TARGET_SHA b6131da
TEST_REPO_ALIAS SCREAM

Using Repos:

Repo: SCREAM (eagles-project/scream)
  • Branch: oscar/wet_scav_strt_balwinder
  • SHA: e17b6c5
  • Mode: TEST_REPO

Pull Request Author: odiazib

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Status Flag 'Pull Request AutoTester' - Jenkins Testing: 1 or more Jobs FAILED

Note: Testing will normally be attempted again in approx. 2 Hrs. If a change to the PR source branch occurs, the testing will be attempted again on next available autotester run.

Pull Request Auto Testing has FAILED (click to expand)

Build Information

Test Name: SCREAM_PullRequest_Autotester_Mappy

  • Build Num: 5477
  • Status: FAILED

Jenkins Parameters

Parameter Name Value
PR_LABELS AT: RETEST;EAGLES
PULLREQUESTNUM 2848
SCREAM_SOURCE_REPO https://github.com/eagles-project/scream
SCREAM_SOURCE_SHA e17b6c5
SCREAM_TARGET_BRANCH master
SCREAM_TARGET_REPO https://github.com/E3SM-Project/scream
SCREAM_TARGET_SHA b6131da
TEST_REPO_ALIAS SCREAM

Build Information

Test Name: SCREAM_PullRequest_Autotester_Weaver

  • Build Num: 5754
  • Status: FAILED

Jenkins Parameters

Parameter Name Value
PR_LABELS AT: RETEST;EAGLES
PULLREQUESTNUM 2848
SCREAM_SOURCE_REPO https://github.com/eagles-project/scream
SCREAM_SOURCE_SHA e17b6c5
SCREAM_TARGET_BRANCH master
SCREAM_TARGET_REPO https://github.com/E3SM-Project/scream
SCREAM_TARGET_SHA b6131da
TEST_REPO_ALIAS SCREAM
SCREAM_PullRequest_Autotester_Mappy # 5477 FAILED (click to see last 100 lines of console output)

test-scheduler took 2848.8493762016296 seconds'
+ errors='Waiting for tests to finish
DIFF ERP_D_Lh4.ne4_ne4.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1 (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERP_D_Lh4.ne4_ne4.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1.C.20240529_070220_d8rghj
FAIL ERP_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-4 (phase RUN)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERP_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-4.C.20240529_070220_d8rghj
FAIL ERS_D_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-rad_frequency_2--scream-output-preset-5 (phase RUN)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERS_D_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-rad_frequency_2--scream-output-preset-5.C.20240529_070220_d8rghj
DIFF ERS_Ln9.ne4_ne4.F2000-SCREAMv1-AQP1.mappy_gnu.scream-output-preset-2 (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERS_Ln9.ne4_ne4.F2000-SCREAMv1-AQP1.mappy_gnu.scream-output-preset-2.C.20240529_070220_d8rghj
DIFF ERS_P16_Ln22.ne30_ne30.F2010-SCREAMv1-DP-DYCOMSrf01.mappy_gnu (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERS_P16_Ln22.ne30_ne30.F2010-SCREAMv1-DP-DYCOMSrf01.mappy_gnu.C.20240529_070220_d8rghj
DIFF PET_Ln9_P32x2.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1 (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/PET_Ln9_P32x2.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1.C.20240529_070220_d8rghj
DIFF SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-optics (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-optics.C.20240529_070220_d8rghj
DIFF SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-wetscav (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-wetscav.C.20240529_070220_d8rghj
DIFF SMS_D_Ln9.ne4_ne4.F2010-SCREAMv1-noAero.mappy_gnu.scream-output-preset-3 (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln9.ne4_ne4.F2010-SCREAMv1-noAero.mappy_gnu.scream-output-preset-3.C.20240529_070220_d8rghj
test-scheduler took 2848.8493762016296 seconds'
+ V1_FAILURES_DETAILS+='Waiting for tests to finish
DIFF ERP_D_Lh4.ne4_ne4.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1 (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERP_D_Lh4.ne4_ne4.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1.C.20240529_070220_d8rghj
FAIL ERP_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-4 (phase RUN)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERP_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-4.C.20240529_070220_d8rghj
FAIL ERS_D_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-rad_frequency_2--scream-output-preset-5 (phase RUN)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERS_D_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-rad_frequency_2--scream-output-preset-5.C.20240529_070220_d8rghj
DIFF ERS_Ln9.ne4_ne4.F2000-SCREAMv1-AQP1.mappy_gnu.scream-output-preset-2 (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERS_Ln9.ne4_ne4.F2000-SCREAMv1-AQP1.mappy_gnu.scream-output-preset-2.C.20240529_070220_d8rghj
DIFF ERS_P16_Ln22.ne30_ne30.F2010-SCREAMv1-DP-DYCOMSrf01.mappy_gnu (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERS_P16_Ln22.ne30_ne30.F2010-SCREAMv1-DP-DYCOMSrf01.mappy_gnu.C.20240529_070220_d8rghj
DIFF PET_Ln9_P32x2.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1 (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/PET_Ln9_P32x2.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1.C.20240529_070220_d8rghj
DIFF SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-optics (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-optics.C.20240529_070220_d8rghj
DIFF SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-wetscav (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-wetscav.C.20240529_070220_d8rghj
DIFF SMS_D_Ln9.ne4_ne4.F2010-SCREAMv1-noAero.mappy_gnu.scream-output-preset-3 (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln9.ne4_ne4.F2010-SCREAMv1-noAero.mappy_gnu.scream-output-preset-3.C.20240529_070220_d8rghj
test-scheduler took 2848.8493762016296 seconds'
+ set +x
######################################################
FAILS DETECTED:
  SCREAM STANDALONE TESTING FAILED!
Build type full_debug failed at testing time. Here's a list of failed tests:
286:p3_standalone_baseline_cmp
306:shoc_standalone_baseline_cmp
351:mam4_wetscav_standalone_np2_vs_np1
352:mam4_wetscav_standalone_np3_vs_np1
353:mam4_wetscav_standalone_np4_vs_np1
354:mam4_wetscav_standalone_baseline_cmp
400:homme_shoc_cld_p3_rrtmgp_pg2_baseline_cmp
424:homme_shoc_cld_spa_p3_rrtmgp_128levels_baseline_cmp
448:homme_shoc_cld_spa_p3_rrtmgp_mam4_wetscav_baseline_cmp
  SCREAM V1 TESTING FAILED!
Waiting for tests to finish
DIFF ERP_D_Lh4.ne4_ne4.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1 (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERP_D_Lh4.ne4_ne4.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1.C.20240529_070220_d8rghj
FAIL ERP_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-4 (phase RUN)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERP_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-4.C.20240529_070220_d8rghj
FAIL ERS_D_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-rad_frequency_2--scream-output-preset-5 (phase RUN)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERS_D_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-rad_frequency_2--scream-output-preset-5.C.20240529_070220_d8rghj
DIFF ERS_Ln9.ne4_ne4.F2000-SCREAMv1-AQP1.mappy_gnu.scream-output-preset-2 (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERS_Ln9.ne4_ne4.F2000-SCREAMv1-AQP1.mappy_gnu.scream-output-preset-2.C.20240529_070220_d8rghj
DIFF ERS_P16_Ln22.ne30_ne30.F2010-SCREAMv1-DP-DYCOMSrf01.mappy_gnu (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERS_P16_Ln22.ne30_ne30.F2010-SCREAMv1-DP-DYCOMSrf01.mappy_gnu.C.20240529_070220_d8rghj
DIFF PET_Ln9_P32x2.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1 (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/PET_Ln9_P32x2.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1.C.20240529_070220_d8rghj
DIFF SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-optics (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-optics.C.20240529_070220_d8rghj
DIFF SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-wetscav (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-wetscav.C.20240529_070220_d8rghj
DIFF SMS_D_Ln9.ne4_ne4.F2010-SCREAMv1-noAero.mappy_gnu.scream-output-preset-3 (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln9.ne4_ne4.F2010-SCREAMv1-noAero.mappy_gnu.scream-output-preset-3.C.20240529_070220_d8rghj
test-scheduler took 2848.8493762016296 seconds
######################################################
Build step 'Execute shell' marked build as failure
$ ssh-agent -k
unset SSH_AUTH_SOCK;
unset SSH_AGENT_PID;
echo Agent pid 27517 killed;
[ssh-agent] Stopped.
Performing Post build task...
Match found for : : True
Logical operation result is TRUE
Running script  : #!/bin/bash -le

cd $WORKSPACE/${BUILD_ID}/

./scream/components/eamxx/scripts/jenkins/jenkins_cleanup.sh

We're having issues with some test-launcher job hanging forever. So let's make sure we clean all penting test-launcher jobs

squeue -o"%.7i %u %40j" | grep e3sm-jenkins | grep test-launcher | awk '{ print $1 }' | xargs -r scancel

[SCREAM_PullRequest_Autotester_Mappy] $ /bin/bash -le /tmp/jenkins9497646159883444425.sh
POST BUILD TASK : SUCCESS
END OF POST BUILD TASK : 0
Sending e-mails to: lbertag@sandia.gov
Finished: FAILURE

SCREAM_PullRequest_Autotester_Weaver # 5754 FAILED (click to see last 100 lines of console output)

58:virtual_temperature
59:atmosphere_density
60:vertical_layer
61:dry_static_energy
62:sea_level_pressure
63:water_path
64:shortwave_cloud_forcing
65:longwave_cloud_forcing
66:relative_humidity
67:vapor_flux
68:precip_surf_mass_flux
69:surface_upward_latent_heat_flux
70:wind_speed
71:aodvis
72:number_paths
73:aerocom_cld
74:ad_ut
76:scream_fpe_check
77:bfbhash
78:homme_standalone_np1
79:homme_standalone_baseline_cmp
80:p3_standalone_np1
81:p3_tend_check_np1
82:p3_standalone_baseline_cmp
83:shoc_standalone_np1
84:shoc_tend_check_np1
85:check_U_V_slices_np1
86:check_surf_mom_flux_slices_np1
87:shoc_standalone_baseline_cmp
88:check_U_V_slices_fail_diff
89:check_U_V_slices_fail_layout
90:check_U_V_slices_fail_missing
91:cld_fraction_standalone
92:spa_standalone_np1
93:spa_standalone_baseline_cmp
94:surface_coupling_np1
95:rrtmgp_standalone_unit
96:rrtmgp_standalone_not_chunked_np1
97:rrtmgp_standalone_chunked
98:rrtmgp_standalone_chunked_vs_not_chunked
99:rrtmgp_standalone_chunked_baseline_cmp
100:cosp_standalone_np1
101:cosp_standalone_baseline_cmp
102:mam4_optics_standalone_np1
103:mam4_optics_standalone_baseline_cmp
104:mam4_wetscav_standalone_np1
105:mam4_wetscav_standalone_baseline_cmp
106:shoc_cld_p3_rrtmgp_np1
107:shoc_cld_spa_p3_rrtmgp_np1
108:mam_optics_rrtmgp_np1
109:shoc_p3_subcycled
110:shoc_p3_monolithic
111:check_subcycling
112:check_subcycling_tend_check
113:create_vert_remap_and_weights
114:shoc_p3_source
115:shoc_p3_nudged
116:shoc_p3_nudged_remapped
117:shoc_p3_nudging_glob_novert
118:homme_shoc_cld_p3_rrtmgp_np1
119:homme_shoc_cld_p3_rrtmgp_baseline_cmp
120:homme_shoc_cld_p3_rrtmgp_pg2_np1
121:homme_shoc_cld_p3_rrtmgp_pg2_baseline_cmp
122:model_baseline
123:model_initial
124:model_restart
125:restarted_vs_monolithic_check_np1
126:homme_shoc_cld_spa_p3_rrtmgp_np1
127:homme_shoc_cld_spa_p3_rrtmgp_baseline_cmp
128:homme_shoc_cld_spa_p3_rrtmgp_128levels_np1
129:homme_shoc_cld_spa_p3_rrtmgp_128levels_tend_check_np1
130:homme_shoc_cld_spa_p3_rrtmgp_128levels_baseline_cmp
131:homme_shoc_cld_spa_p3_rrtmgp_pg2_dp_np1
132:homme_shoc_cld_spa_p3_rrtmgp_pg2_dp_baseline_cmp
133:homme_shoc_cld_p3_mam_optics_rrtmgp_np1
134:homme_shoc_cld_p3_mam_optics_rrtmgp_baseline_cmp
135:homme_shoc_cld_spa_p3_rrtmgp_mam4_wetscav_np1
136:homme_shoc_cld_spa_p3_rrtmgp_mam4_wetscav_baseline_cmp

Error(s) occurred during test phase
OVERALL STATUS: FAIL
Starting analysis on weaver with cmd: cd /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5754/scream/components/eamxx && source /etc/profile.d/modules.sh && module purge && module load cmake/3.25.1 git/2.39.1 python/3.10.8 py-netcdf4/1.5.8 gcc/11.3.0 cuda/11.8.0 openmpi netcdf-c netcdf-fortran parallel-netcdf netlib-lapack && export HDF5_USE_FILE_LOCKING=FALSE && true && bsub -I -q rhel8 -n 4 -gpu num=4 ./scripts/test-all-scream --baseline-dir AUTO $compiler -p -c EKAT_DISABLE_TPL_WARNINGS=ON -i -m weaver
RUN: cd /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5754/scream/components/eamxx && source /etc/profile.d/modules.sh && module purge && module load cmake/3.25.1 git/2.39.1 python/3.10.8 py-netcdf4/1.5.8 gcc/11.3.0 cuda/11.8.0 openmpi netcdf-c netcdf-fortran parallel-netcdf netlib-lapack && export HDF5_USE_FILE_LOCKING=FALSE && true && bsub -I -q rhel8 -n 4 -gpu num=4 ./scripts/test-all-scream --baseline-dir AUTO $compiler -p -c EKAT_DISABLE_TPL_WARNINGS=ON -i -m weaver
FROM: /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5754/scream/components/eamxx
weaver failed
######################################################
Build step 'Execute shell' marked build as failure
Performing Post build task...
Match found for : : True
Logical operation result is TRUE
Running script : #!/bin/bash -le

cd $WORKSPACE/${BUILD_ID}/

./scream/components/eamxx/scripts/jenkins/jenkins_cleanup.sh
[SCREAM_PullRequest_Autotester_Weaver] $ /bin/bash -le /tmp/jenkins8331161238344529709.sh
POST BUILD TASK : SUCCESS
END OF POST BUILD TASK : 0
Sending e-mails to: lbertag@sandia.gov
Finished: FAILURE

@singhbalwinder
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@singhbalwinder , can you please add the timing data for this PR? Once that is done, it looks like this PR is in good shape.

I will add this info after the tests are run.

@overfelt overfelt dismissed stale reviews from mahf708 and kaizhangpnl via 1f77bf0 July 29, 2024 16:56
bartgol
bartgol previously approved these changes Jul 29, 2024
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Status Flag 'Pull Request AutoTester' - User Requested Retest - Label AT: RETEST will be reset after testing.

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Status Flag 'Pre-Test Inspection' - SUCCESS: The last commit to this Pull Request has been INSPECTED by label AT: PRE-TEST INSPECTED! Autotester is Removing Label; this inspection will remain valid until a new commit to source branch is performed.

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Status Flag 'Pull Request AutoTester' - Testing Jenkins Projects:

Pull Request Auto Testing STARTING (click to expand)

Build Information

Test Name: SCREAM_PullRequest_Autotester_Mappy

  • Build Num: 5719
  • Status: STARTED

Jenkins Parameters

Parameter Name Value
PR_LABELS AT: RETEST;EAGLES;Stealth
PULLREQUESTNUM 2848
SCREAM_SOURCE_REPO https://github.com/eagles-project/scream
SCREAM_SOURCE_SHA 2890ec1
SCREAM_TARGET_BRANCH master
SCREAM_TARGET_REPO https://github.com/E3SM-Project/scream
SCREAM_TARGET_SHA 27b21e2
TEST_REPO_ALIAS SCREAM

Build Information

Test Name: SCREAM_PullRequest_Autotester_Weaver

  • Build Num: 5953
  • Status: STARTED

Jenkins Parameters

Parameter Name Value
PR_LABELS AT: RETEST;EAGLES;Stealth
PULLREQUESTNUM 2848
SCREAM_SOURCE_REPO https://github.com/eagles-project/scream
SCREAM_SOURCE_SHA 2890ec1
SCREAM_TARGET_BRANCH master
SCREAM_TARGET_REPO https://github.com/E3SM-Project/scream
SCREAM_TARGET_SHA 27b21e2
TEST_REPO_ALIAS SCREAM

Using Repos:

Repo: SCREAM (eagles-project/scream)
  • Branch: oscar/wet_scav_strt_balwinder
  • SHA: 2890ec1
  • Mode: TEST_REPO

Pull Request Author: odiazib

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Status Flag 'Pull Request AutoTester' - Jenkins Testing: 1 or more Jobs FAILED

Note: Testing will normally be attempted again in approx. 2 Hrs. If a change to the PR source branch occurs, the testing will be attempted again on next available autotester run.

Pull Request Auto Testing has FAILED (click to expand)

Build Information

Test Name: SCREAM_PullRequest_Autotester_Mappy

  • Build Num: 5719
  • Status: FAILED

Jenkins Parameters

Parameter Name Value
PR_LABELS AT: RETEST;EAGLES;Stealth
PULLREQUESTNUM 2848
SCREAM_SOURCE_REPO https://github.com/eagles-project/scream
SCREAM_SOURCE_SHA 2890ec1
SCREAM_TARGET_BRANCH master
SCREAM_TARGET_REPO https://github.com/E3SM-Project/scream
SCREAM_TARGET_SHA 27b21e2
TEST_REPO_ALIAS SCREAM

Build Information

Test Name: SCREAM_PullRequest_Autotester_Weaver

  • Build Num: 5953
  • Status: FAILED

Jenkins Parameters

Parameter Name Value
PR_LABELS AT: RETEST;EAGLES;Stealth
PULLREQUESTNUM 2848
SCREAM_SOURCE_REPO https://github.com/eagles-project/scream
SCREAM_SOURCE_SHA 2890ec1
SCREAM_TARGET_BRANCH master
SCREAM_TARGET_REPO https://github.com/E3SM-Project/scream
SCREAM_TARGET_SHA 27b21e2
TEST_REPO_ALIAS SCREAM
SCREAM_PullRequest_Autotester_Mappy # 5719 FAILED (click to see last 100 lines of console output)

    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln9.ne4_ne4.F2010-SCREAMv1-noAero.mappy_gnu.scream-output-preset-3.C.20240729_152058_jmgcqd
test-scheduler took 934.0806109905243 seconds'
+ errors='Waiting for tests to finish
PASS ERP_D_Lh4.ne4_ne4.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1 RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERP_D_Lh4.ne4_ne4.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1.C.20240729_152058_jmgcqd
PASS ERP_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-4 RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERP_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-4.C.20240729_152058_jmgcqd
PASS ERS_D_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-rad_frequency_2--scream-output-preset-5 RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERS_D_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-rad_frequency_2--scream-output-preset-5.C.20240729_152058_jmgcqd
PASS ERS_Ln9.ne4_ne4.F2000-SCREAMv1-AQP1.mappy_gnu.scream-output-preset-2 RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERS_Ln9.ne4_ne4.F2000-SCREAMv1-AQP1.mappy_gnu.scream-output-preset-2.C.20240729_152058_jmgcqd
PASS ERS_P16_Ln22.ne30_ne30.F2010-SCREAMv1-DP-DYCOMSrf01.mappy_gnu RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERS_P16_Ln22.ne30_ne30.F2010-SCREAMv1-DP-DYCOMSrf01.mappy_gnu.C.20240729_152058_jmgcqd
PASS PET_Ln9_P32x2.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1 RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/PET_Ln9_P32x2.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1.C.20240729_152058_jmgcqd
PASS SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-aci RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-aci.C.20240729_152058_jmgcqd
PASS SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-optics RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-optics.C.20240729_152058_jmgcqd
DIFF SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-wetscav (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-wetscav.C.20240729_152058_jmgcqd
PASS SMS_D_Ln9.ne4_ne4.F2010-SCREAMv1-noAero.mappy_gnu.scream-output-preset-3 RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln9.ne4_ne4.F2010-SCREAMv1-noAero.mappy_gnu.scream-output-preset-3.C.20240729_152058_jmgcqd
test-scheduler took 934.0806109905243 seconds'
+ V1_FAILURES_DETAILS+='Waiting for tests to finish
PASS ERP_D_Lh4.ne4_ne4.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1 RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERP_D_Lh4.ne4_ne4.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1.C.20240729_152058_jmgcqd
PASS ERP_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-4 RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERP_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-4.C.20240729_152058_jmgcqd
PASS ERS_D_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-rad_frequency_2--scream-output-preset-5 RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERS_D_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-rad_frequency_2--scream-output-preset-5.C.20240729_152058_jmgcqd
PASS ERS_Ln9.ne4_ne4.F2000-SCREAMv1-AQP1.mappy_gnu.scream-output-preset-2 RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERS_Ln9.ne4_ne4.F2000-SCREAMv1-AQP1.mappy_gnu.scream-output-preset-2.C.20240729_152058_jmgcqd
PASS ERS_P16_Ln22.ne30_ne30.F2010-SCREAMv1-DP-DYCOMSrf01.mappy_gnu RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERS_P16_Ln22.ne30_ne30.F2010-SCREAMv1-DP-DYCOMSrf01.mappy_gnu.C.20240729_152058_jmgcqd
PASS PET_Ln9_P32x2.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1 RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/PET_Ln9_P32x2.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1.C.20240729_152058_jmgcqd
PASS SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-aci RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-aci.C.20240729_152058_jmgcqd
PASS SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-optics RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-optics.C.20240729_152058_jmgcqd
DIFF SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-wetscav (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-wetscav.C.20240729_152058_jmgcqd
PASS SMS_D_Ln9.ne4_ne4.F2010-SCREAMv1-noAero.mappy_gnu.scream-output-preset-3 RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln9.ne4_ne4.F2010-SCREAMv1-noAero.mappy_gnu.scream-output-preset-3.C.20240729_152058_jmgcqd
test-scheduler took 934.0806109905243 seconds'
+ set +x
######################################################
FAILS DETECTED:
  SCREAM STANDALONE TESTING FAILED!
Build type full_debug failed at testing time. Here's a list of failed tests:
368:mam4_wetscav_standalone_baseline_cmp
504:homme_shoc_cld_spa_p3_rrtmgp_mam4_wetscav_baseline_cmp
  SCREAM V1 TESTING FAILED!
Waiting for tests to finish
PASS ERP_D_Lh4.ne4_ne4.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1 RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERP_D_Lh4.ne4_ne4.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1.C.20240729_152058_jmgcqd
PASS ERP_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-4 RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERP_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-4.C.20240729_152058_jmgcqd
PASS ERS_D_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-rad_frequency_2--scream-output-preset-5 RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERS_D_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-rad_frequency_2--scream-output-preset-5.C.20240729_152058_jmgcqd
PASS ERS_Ln9.ne4_ne4.F2000-SCREAMv1-AQP1.mappy_gnu.scream-output-preset-2 RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERS_Ln9.ne4_ne4.F2000-SCREAMv1-AQP1.mappy_gnu.scream-output-preset-2.C.20240729_152058_jmgcqd
PASS ERS_P16_Ln22.ne30_ne30.F2010-SCREAMv1-DP-DYCOMSrf01.mappy_gnu RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERS_P16_Ln22.ne30_ne30.F2010-SCREAMv1-DP-DYCOMSrf01.mappy_gnu.C.20240729_152058_jmgcqd
PASS PET_Ln9_P32x2.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1 RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/PET_Ln9_P32x2.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1.C.20240729_152058_jmgcqd
PASS SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-aci RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-aci.C.20240729_152058_jmgcqd
PASS SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-optics RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-optics.C.20240729_152058_jmgcqd
DIFF SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-wetscav (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-wetscav.C.20240729_152058_jmgcqd
PASS SMS_D_Ln9.ne4_ne4.F2010-SCREAMv1-noAero.mappy_gnu.scream-output-preset-3 RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln9.ne4_ne4.F2010-SCREAMv1-noAero.mappy_gnu.scream-output-preset-3.C.20240729_152058_jmgcqd
test-scheduler took 934.0806109905243 seconds
######################################################
Build step 'Execute shell' marked build as failure
$ ssh-agent -k
unset SSH_AUTH_SOCK;
unset SSH_AGENT_PID;
echo Agent pid 23218 killed;
[ssh-agent] Stopped.
Performing Post build task...
Match found for : : True
Logical operation result is TRUE
Running script  : #!/bin/bash -le

cd $WORKSPACE/${BUILD_ID}/

./scream/components/eamxx/scripts/jenkins/jenkins_cleanup.sh

We're having issues with some test-launcher job hanging forever. So let's make sure we clean all penting test-launcher jobs

squeue -o"%.7i %u %40j" | grep e3sm-jenkins | grep test-launcher | awk '{ print $1 }' | xargs -r scancel

[SCREAM_PullRequest_Autotester_Mappy] $ /bin/bash -le /tmp/jenkins16350461987944041092.sh
POST BUILD TASK : SUCCESS
END OF POST BUILD TASK : 0
Sending e-mails to: lbertag@sandia.gov
Finished: FAILURE

SCREAM_PullRequest_Autotester_Weaver # 5953 FAILED (click to see last 100 lines of console output)

FROM: /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5953/scream/components/eamxx/ctest-build/full_sp_debug
===============================================================================
Testing '\''5c658b1220b10771f0dc2369f97c8d9b9e8666fc'\'' for test '\''release'\''
===============================================================================
RUN: taskset -c 104-155 sh -c '\''SCREAM_BUILD_PARALLEL_LEVEL=52 CTEST_PARALLEL_LEVEL=1 ctest -V --output-on-failure --resource-spec-file /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5953/scream/components/eamxx/ctest-build/release/ctest_resource_file.json -DNO_SUBMIT=True -DBUILD_WORK_DIR=/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5953/scream/components/eamxx/ctest-build/release -DBUILD_NAME_MOD=release -S /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5953/scream/components/eamxx/cmake/ctest_script.cmake -DCTEST_SITE=weaver -DCMAKE_COMMAND="-C /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5953/scream/components/eamxx/cmake/machine-files/weaver.cmake -DNetCDF_Fortran_PATH=/projects/ppc64le-pwr9-rhel8/tpls/netcdf-fortran/4.6.1/gcc/11.3.0/openmpi/4.1.6/5tv5psl -DNetCDF_C_PATH=/projects/ppc64le-pwr9-rhel8/tpls/netcdf-c/4.9.2/gcc/11.3.0/openmpi/4.1.6/pyuuqd3 -DPnetCDF_C_PATH=/projects/ppc64le-pwr9-rhel8/tpls/parallel-netcdf/1.12.3/gcc/11.3.0/openmpi/4.1.6/2s52shy -DCMAKE_BUILD_TYPE=Release -DEKAT_DISABLE_TPL_WARNINGS='\''\'\'''\''ON'\''\'\'''\'' -DCMAKE_CXX_COMPILER=mpicxx -DCMAKE_C_COMPILER=mpicc -DCMAKE_Fortran_COMPILER=mpifort -DSCREAM_DYNAMICS_DYCORE=HOMME -DSCREAM_TEST_MAX_TOTAL_THREADS=1 -DSCREAM_BASELINES_DIR=/home/projects/e3sm/scream/pr-autotester/master-baselines/weaver/release" '\''
FROM: /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5953/scream/components/eamxx/ctest-build/release
===============================================================================
Testing '\''5c658b1220b10771f0dc2369f97c8d9b9e8666fc'\'' for test '\''full_debug'\''
===============================================================================
RUN: taskset -c 0-51 sh -c '\''SCREAM_BUILD_PARALLEL_LEVEL=52 CTEST_PARALLEL_LEVEL=1 ctest -V --output-on-failure --resource-spec-file /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5953/scream/components/eamxx/ctest-build/full_debug/ctest_resource_file.json -DNO_SUBMIT=True -DBUILD_WORK_DIR=/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5953/scream/components/eamxx/ctest-build/full_debug -DBUILD_NAME_MOD=full_debug -S /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5953/scream/components/eamxx/cmake/ctest_script.cmake -DCTEST_SITE=weaver -DCMAKE_COMMAND="-C /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5953/scream/components/eamxx/cmake/machine-files/weaver.cmake -DNetCDF_Fortran_PATH=/projects/ppc64le-pwr9-rhel8/tpls/netcdf-fortran/4.6.1/gcc/11.3.0/openmpi/4.1.6/5tv5psl -DNetCDF_C_PATH=/projects/ppc64le-pwr9-rhel8/tpls/netcdf-c/4.9.2/gcc/11.3.0/openmpi/4.1.6/pyuuqd3 -DPnetCDF_C_PATH=/projects/ppc64le-pwr9-rhel8/tpls/parallel-netcdf/1.12.3/gcc/11.3.0/openmpi/4.1.6/2s52shy -DCMAKE_BUILD_TYPE=Debug -DEKAT_DEFAULT_BFB=True -DKokkos_ENABLE_DEBUG_BOUNDS_CHECK=True -DEKAT_DISABLE_TPL_WARNINGS='\''\'\'''\''ON'\''\'\'''\'' -DCMAKE_CXX_COMPILER=mpicxx -DCMAKE_C_COMPILER=mpicc -DCMAKE_Fortran_COMPILER=mpifort -DSCREAM_DYNAMICS_DYCORE=HOMME -DSCREAM_TEST_MAX_TOTAL_THREADS=1 -DSCREAM_BASELINES_DIR=/home/projects/e3sm/scream/pr-autotester/master-baselines/weaver/full_debug" '\''
FROM: /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5953/scream/components/eamxx/ctest-build/full_debug
Build type full_debug failed at testing time. Here'\''s a list of failed tests:
110:mam4_wetscav_standalone_baseline_cmp
147:homme_shoc_cld_spa_p3_rrtmgp_mam4_wetscav_baseline_cmp

Build type full_sp_debug failed at testing time. Here'''s a list of failed tests:
95:mam4_wetscav_standalone_baseline_cmp

Build type release failed at testing time. Here'''s a list of failed tests:
109:mam4_wetscav_standalone_baseline_cmp
146:homme_shoc_cld_spa_p3_rrtmgp_mam4_wetscav_baseline_cmp

Error(s) occurred during test phase
OVERALL STATUS: FAIL
Starting analysis on weaver with cmd: cd /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5953/scream/components/eamxx && source /etc/profile.d/modules.sh && module purge && module load cmake/3.25.1 git/2.39.1 python/3.10.8 py-netcdf4/1.5.8 gcc/11.3.0 cuda/11.8.0 openmpi netcdf-c netcdf-fortran parallel-netcdf netlib-lapack && export HDF5_USE_FILE_LOCKING=FALSE && true && bsub -I -q rhel8 -n 4 -gpu num=4 ./scripts/test-all-scream --baseline-dir AUTO $compiler -p -c EKAT_DISABLE_TPL_WARNINGS=ON -m weaver
RUN: cd /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5953/scream/components/eamxx && source /etc/profile.d/modules.sh && module purge && module load cmake/3.25.1 git/2.39.1 python/3.10.8 py-netcdf4/1.5.8 gcc/11.3.0 cuda/11.8.0 openmpi netcdf-c netcdf-fortran parallel-netcdf netlib-lapack && export HDF5_USE_FILE_LOCKING=FALSE && true && bsub -I -q rhel8 -n 4 -gpu num=4 ./scripts/test-all-scream --baseline-dir AUTO $compiler -p -c EKAT_DISABLE_TPL_WARNINGS=ON -m weaver
FROM: /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5953/scream/components/eamxx
weaver failed'

  • errors='Build type full_debug failed at testing time. Here'''s a list of failed tests:
    110:mam4_wetscav_standalone_baseline_cmp
    147:homme_shoc_cld_spa_p3_rrtmgp_mam4_wetscav_baseline_cmp

Build type full_sp_debug failed at testing time. Here'''s a list of failed tests:
95:mam4_wetscav_standalone_baseline_cmp

Build type release failed at testing time. Here'''s a list of failed tests:
109:mam4_wetscav_standalone_baseline_cmp
146:homme_shoc_cld_spa_p3_rrtmgp_mam4_wetscav_baseline_cmp

Error(s) occurred during test phase
OVERALL STATUS: FAIL
Starting analysis on weaver with cmd: cd /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5953/scream/components/eamxx && source /etc/profile.d/modules.sh && module purge && module load cmake/3.25.1 git/2.39.1 python/3.10.8 py-netcdf4/1.5.8 gcc/11.3.0 cuda/11.8.0 openmpi netcdf-c netcdf-fortran parallel-netcdf netlib-lapack && export HDF5_USE_FILE_LOCKING=FALSE && true && bsub -I -q rhel8 -n 4 -gpu num=4 ./scripts/test-all-scream --baseline-dir AUTO $compiler -p -c EKAT_DISABLE_TPL_WARNINGS=ON -m weaver
RUN: cd /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5953/scream/components/eamxx && source /etc/profile.d/modules.sh && module purge && module load cmake/3.25.1 git/2.39.1 python/3.10.8 py-netcdf4/1.5.8 gcc/11.3.0 cuda/11.8.0 openmpi netcdf-c netcdf-fortran parallel-netcdf netlib-lapack && export HDF5_USE_FILE_LOCKING=FALSE && true && bsub -I -q rhel8 -n 4 -gpu num=4 ./scripts/test-all-scream --baseline-dir AUTO $compiler -p -c EKAT_DISABLE_TPL_WARNINGS=ON -m weaver
FROM: /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5953/scream/components/eamxx
weaver failed'

  • SA_FAILURES_DETAILS+='Build type full_debug failed at testing time. Here'''s a list of failed tests:
    110:mam4_wetscav_standalone_baseline_cmp
    147:homme_shoc_cld_spa_p3_rrtmgp_mam4_wetscav_baseline_cmp

Build type full_sp_debug failed at testing time. Here'''s a list of failed tests:
95:mam4_wetscav_standalone_baseline_cmp

Build type release failed at testing time. Here'''s a list of failed tests:
109:mam4_wetscav_standalone_baseline_cmp
146:homme_shoc_cld_spa_p3_rrtmgp_mam4_wetscav_baseline_cmp

Error(s) occurred during test phase
OVERALL STATUS: FAIL
Starting analysis on weaver with cmd: cd /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5953/scream/components/eamxx && source /etc/profile.d/modules.sh && module purge && module load cmake/3.25.1 git/2.39.1 python/3.10.8 py-netcdf4/1.5.8 gcc/11.3.0 cuda/11.8.0 openmpi netcdf-c netcdf-fortran parallel-netcdf netlib-lapack && export HDF5_USE_FILE_LOCKING=FALSE && true && bsub -I -q rhel8 -n 4 -gpu num=4 ./scripts/test-all-scream --baseline-dir AUTO $compiler -p -c EKAT_DISABLE_TPL_WARNINGS=ON -m weaver
RUN: cd /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5953/scream/components/eamxx && source /etc/profile.d/modules.sh && module purge && module load cmake/3.25.1 git/2.39.1 python/3.10.8 py-netcdf4/1.5.8 gcc/11.3.0 cuda/11.8.0 openmpi netcdf-c netcdf-fortran parallel-netcdf netlib-lapack && export HDF5_USE_FILE_LOCKING=FALSE && true && bsub -I -q rhel8 -n 4 -gpu num=4 ./scripts/test-all-scream --baseline-dir AUTO $compiler -p -c EKAT_DISABLE_TPL_WARNINGS=ON -m weaver
FROM: /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5953/scream/components/eamxx
weaver failed'

  • [[ 1 == 0 ]]
  • [[ weaver == \m\a\p\p\y ]]
  • set +x
    ######################################################
    FAILS DETECTED:
    SCREAM STANDALONE TESTING FAILED!
    Build type full_debug failed at testing time. Here's a list of failed tests:
    110:mam4_wetscav_standalone_baseline_cmp
    147:homme_shoc_cld_spa_p3_rrtmgp_mam4_wetscav_baseline_cmp

Build type full_sp_debug failed at testing time. Here's a list of failed tests:
95:mam4_wetscav_standalone_baseline_cmp

Build type release failed at testing time. Here's a list of failed tests:
109:mam4_wetscav_standalone_baseline_cmp
146:homme_shoc_cld_spa_p3_rrtmgp_mam4_wetscav_baseline_cmp

Error(s) occurred during test phase
OVERALL STATUS: FAIL
Starting analysis on weaver with cmd: cd /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5953/scream/components/eamxx && source /etc/profile.d/modules.sh && module purge && module load cmake/3.25.1 git/2.39.1 python/3.10.8 py-netcdf4/1.5.8 gcc/11.3.0 cuda/11.8.0 openmpi netcdf-c netcdf-fortran parallel-netcdf netlib-lapack && export HDF5_USE_FILE_LOCKING=FALSE && true && bsub -I -q rhel8 -n 4 -gpu num=4 ./scripts/test-all-scream --baseline-dir AUTO $compiler -p -c EKAT_DISABLE_TPL_WARNINGS=ON -m weaver
RUN: cd /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5953/scream/components/eamxx && source /etc/profile.d/modules.sh && module purge && module load cmake/3.25.1 git/2.39.1 python/3.10.8 py-netcdf4/1.5.8 gcc/11.3.0 cuda/11.8.0 openmpi netcdf-c netcdf-fortran parallel-netcdf netlib-lapack && export HDF5_USE_FILE_LOCKING=FALSE && true && bsub -I -q rhel8 -n 4 -gpu num=4 ./scripts/test-all-scream --baseline-dir AUTO $compiler -p -c EKAT_DISABLE_TPL_WARNINGS=ON -m weaver
FROM: /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5953/scream/components/eamxx
weaver failed
######################################################
Build step 'Execute shell' marked build as failure
Performing Post build task...
Match found for : : True
Logical operation result is TRUE
Running script : #!/bin/bash -le

cd $WORKSPACE/${BUILD_ID}/

./scream/components/eamxx/scripts/jenkins/jenkins_cleanup.sh
[SCREAM_PullRequest_Autotester_Weaver] $ /bin/bash -le /tmp/jenkins8118632513433617227.sh
POST BUILD TASK : SUCCESS
END OF POST BUILD TASK : 0
Sending e-mails to: lbertag@sandia.gov
Finished: FAILURE

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Status Flag 'Pre-Test Inspection' - - This Pull Request Requires Inspection... The code must be inspected by a member of the Team before Testing/Merging
NO INSPECTION HAS BEEN PERFORMED ON THIS PULL REQUEST! - This PR must be inspected by setting label 'AT: PRE-TEST INSPECTED'.

This reverts commit 8fd0eae.

There are fields that need to be in the FieldManager since
this is still in the evaluation stage.
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Status Flag 'Pull Request AutoTester' - User Requested Retest - Label AT: RETEST will be reset after testing.

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Status Flag 'Pre-Test Inspection' - SUCCESS: The last commit to this Pull Request has been INSPECTED by label AT: PRE-TEST INSPECTED! Autotester is Removing Label; this inspection will remain valid until a new commit to source branch is performed.

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Status Flag 'Pull Request AutoTester' - Testing Jenkins Projects:

Pull Request Auto Testing STARTING (click to expand)

Build Information

Test Name: SCREAM_PullRequest_Autotester_Mappy

  • Build Num: 5734
  • Status: STARTED

Jenkins Parameters

Parameter Name Value
PR_LABELS AT: RETEST;EAGLES;Stealth
PULLREQUESTNUM 2848
SCREAM_SOURCE_REPO https://github.com/eagles-project/scream
SCREAM_SOURCE_SHA 29d83eb
SCREAM_TARGET_BRANCH master
SCREAM_TARGET_REPO https://github.com/E3SM-Project/scream
SCREAM_TARGET_SHA 27b21e2
TEST_REPO_ALIAS SCREAM

Build Information

Test Name: SCREAM_PullRequest_Autotester_Weaver

  • Build Num: 5965
  • Status: STARTED

Jenkins Parameters

Parameter Name Value
PR_LABELS AT: RETEST;EAGLES;Stealth
PULLREQUESTNUM 2848
SCREAM_SOURCE_REPO https://github.com/eagles-project/scream
SCREAM_SOURCE_SHA 29d83eb
SCREAM_TARGET_BRANCH master
SCREAM_TARGET_REPO https://github.com/E3SM-Project/scream
SCREAM_TARGET_SHA 27b21e2
TEST_REPO_ALIAS SCREAM

Using Repos:

Repo: SCREAM (eagles-project/scream)
  • Branch: oscar/wet_scav_strt_balwinder
  • SHA: 29d83eb
  • Mode: TEST_REPO

Pull Request Author: odiazib

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Status Flag 'Pull Request AutoTester' - Jenkins Testing: 1 or more Jobs FAILED

Note: Testing will normally be attempted again in approx. 2 Hrs. If a change to the PR source branch occurs, the testing will be attempted again on next available autotester run.

Pull Request Auto Testing has FAILED (click to expand)

Build Information

Test Name: SCREAM_PullRequest_Autotester_Mappy

  • Build Num: 5734
  • Status: FAILED

Jenkins Parameters

Parameter Name Value
PR_LABELS AT: RETEST;EAGLES;Stealth
PULLREQUESTNUM 2848
SCREAM_SOURCE_REPO https://github.com/eagles-project/scream
SCREAM_SOURCE_SHA 29d83eb
SCREAM_TARGET_BRANCH master
SCREAM_TARGET_REPO https://github.com/E3SM-Project/scream
SCREAM_TARGET_SHA 27b21e2
TEST_REPO_ALIAS SCREAM

Build Information

Test Name: SCREAM_PullRequest_Autotester_Weaver

  • Build Num: 5965
  • Status: FAILED

Jenkins Parameters

Parameter Name Value
PR_LABELS AT: RETEST;EAGLES;Stealth
PULLREQUESTNUM 2848
SCREAM_SOURCE_REPO https://github.com/eagles-project/scream
SCREAM_SOURCE_SHA 29d83eb
SCREAM_TARGET_BRANCH master
SCREAM_TARGET_REPO https://github.com/E3SM-Project/scream
SCREAM_TARGET_SHA 27b21e2
TEST_REPO_ALIAS SCREAM
SCREAM_PullRequest_Autotester_Mappy # 5734 FAILED (click to see last 100 lines of console output)

    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln9.ne4_ne4.F2010-SCREAMv1-noAero.mappy_gnu.scream-output-preset-3.C.20240730_143616_yed0fc
test-scheduler took 1064.662987947464 seconds'
+ errors='Waiting for tests to finish
PASS ERP_D_Lh4.ne4_ne4.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1 RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERP_D_Lh4.ne4_ne4.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1.C.20240730_143616_yed0fc
PASS ERP_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-4 RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERP_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-4.C.20240730_143616_yed0fc
PASS ERS_D_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-rad_frequency_2--scream-output-preset-5 RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERS_D_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-rad_frequency_2--scream-output-preset-5.C.20240730_143616_yed0fc
PASS ERS_Ln9.ne4_ne4.F2000-SCREAMv1-AQP1.mappy_gnu.scream-output-preset-2 RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERS_Ln9.ne4_ne4.F2000-SCREAMv1-AQP1.mappy_gnu.scream-output-preset-2.C.20240730_143616_yed0fc
PASS ERS_P16_Ln22.ne30_ne30.F2010-SCREAMv1-DP-DYCOMSrf01.mappy_gnu RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERS_P16_Ln22.ne30_ne30.F2010-SCREAMv1-DP-DYCOMSrf01.mappy_gnu.C.20240730_143616_yed0fc
PASS PET_Ln9_P32x2.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1 RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/PET_Ln9_P32x2.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1.C.20240730_143616_yed0fc
PASS SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-aci RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-aci.C.20240730_143616_yed0fc
PASS SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-optics RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-optics.C.20240730_143616_yed0fc
DIFF SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-wetscav (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-wetscav.C.20240730_143616_yed0fc
PASS SMS_D_Ln9.ne4_ne4.F2010-SCREAMv1-noAero.mappy_gnu.scream-output-preset-3 RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln9.ne4_ne4.F2010-SCREAMv1-noAero.mappy_gnu.scream-output-preset-3.C.20240730_143616_yed0fc
test-scheduler took 1064.662987947464 seconds'
+ V1_FAILURES_DETAILS+='Waiting for tests to finish
PASS ERP_D_Lh4.ne4_ne4.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1 RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERP_D_Lh4.ne4_ne4.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1.C.20240730_143616_yed0fc
PASS ERP_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-4 RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERP_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-4.C.20240730_143616_yed0fc
PASS ERS_D_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-rad_frequency_2--scream-output-preset-5 RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERS_D_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-rad_frequency_2--scream-output-preset-5.C.20240730_143616_yed0fc
PASS ERS_Ln9.ne4_ne4.F2000-SCREAMv1-AQP1.mappy_gnu.scream-output-preset-2 RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERS_Ln9.ne4_ne4.F2000-SCREAMv1-AQP1.mappy_gnu.scream-output-preset-2.C.20240730_143616_yed0fc
PASS ERS_P16_Ln22.ne30_ne30.F2010-SCREAMv1-DP-DYCOMSrf01.mappy_gnu RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERS_P16_Ln22.ne30_ne30.F2010-SCREAMv1-DP-DYCOMSrf01.mappy_gnu.C.20240730_143616_yed0fc
PASS PET_Ln9_P32x2.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1 RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/PET_Ln9_P32x2.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1.C.20240730_143616_yed0fc
PASS SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-aci RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-aci.C.20240730_143616_yed0fc
PASS SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-optics RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-optics.C.20240730_143616_yed0fc
DIFF SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-wetscav (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-wetscav.C.20240730_143616_yed0fc
PASS SMS_D_Ln9.ne4_ne4.F2010-SCREAMv1-noAero.mappy_gnu.scream-output-preset-3 RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln9.ne4_ne4.F2010-SCREAMv1-noAero.mappy_gnu.scream-output-preset-3.C.20240730_143616_yed0fc
test-scheduler took 1064.662987947464 seconds'
+ set +x
######################################################
FAILS DETECTED:
  SCREAM STANDALONE TESTING FAILED!
Build type full_debug failed at testing time. Here's a list of failed tests:
368:mam4_wetscav_standalone_baseline_cmp
504:homme_shoc_cld_spa_p3_rrtmgp_mam4_wetscav_baseline_cmp
  SCREAM V1 TESTING FAILED!
Waiting for tests to finish
PASS ERP_D_Lh4.ne4_ne4.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1 RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERP_D_Lh4.ne4_ne4.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1.C.20240730_143616_yed0fc
PASS ERP_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-4 RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERP_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-4.C.20240730_143616_yed0fc
PASS ERS_D_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-rad_frequency_2--scream-output-preset-5 RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERS_D_Ln22.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-rad_frequency_2--scream-output-preset-5.C.20240730_143616_yed0fc
PASS ERS_Ln9.ne4_ne4.F2000-SCREAMv1-AQP1.mappy_gnu.scream-output-preset-2 RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERS_Ln9.ne4_ne4.F2000-SCREAMv1-AQP1.mappy_gnu.scream-output-preset-2.C.20240730_143616_yed0fc
PASS ERS_P16_Ln22.ne30_ne30.F2010-SCREAMv1-DP-DYCOMSrf01.mappy_gnu RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/ERS_P16_Ln22.ne30_ne30.F2010-SCREAMv1-DP-DYCOMSrf01.mappy_gnu.C.20240730_143616_yed0fc
PASS PET_Ln9_P32x2.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1 RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/PET_Ln9_P32x2.ne4pg2_ne4pg2.F2010-SCREAMv1.mappy_gnu.scream-output-preset-1.C.20240730_143616_yed0fc
PASS SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-aci RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-aci.C.20240730_143616_yed0fc
PASS SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-optics RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-optics.C.20240730_143616_yed0fc
DIFF SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-wetscav (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-wetscav.C.20240730_143616_yed0fc
PASS SMS_D_Ln9.ne4_ne4.F2010-SCREAMv1-noAero.mappy_gnu.scream-output-preset-3 RUN
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln9.ne4_ne4.F2010-SCREAMv1-noAero.mappy_gnu.scream-output-preset-3.C.20240730_143616_yed0fc
test-scheduler took 1064.662987947464 seconds
######################################################
Build step 'Execute shell' marked build as failure
$ ssh-agent -k
unset SSH_AUTH_SOCK;
unset SSH_AGENT_PID;
echo Agent pid 125096 killed;
[ssh-agent] Stopped.
Performing Post build task...
Match found for : : True
Logical operation result is TRUE
Running script  : #!/bin/bash -le

cd $WORKSPACE/${BUILD_ID}/

./scream/components/eamxx/scripts/jenkins/jenkins_cleanup.sh

We're having issues with some test-launcher job hanging forever. So let's make sure we clean all penting test-launcher jobs

squeue -o"%.7i %u %40j" | grep e3sm-jenkins | grep test-launcher | awk '{ print $1 }' | xargs -r scancel

[SCREAM_PullRequest_Autotester_Mappy] $ /bin/bash -le /tmp/jenkins6932719041654207950.sh
POST BUILD TASK : SUCCESS
END OF POST BUILD TASK : 0
Sending e-mails to: lbertag@sandia.gov
Finished: FAILURE

SCREAM_PullRequest_Autotester_Weaver # 5965 FAILED (click to see last 100 lines of console output)

FROM: /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5965/scream/components/eamxx/ctest-build/full_sp_debug
===============================================================================
Testing '\''c3c7c165225612a6ef1e0c046f8f4b8d5f5a4ecd'\'' for test '\''release'\''
===============================================================================
RUN: taskset -c 104-155 sh -c '\''SCREAM_BUILD_PARALLEL_LEVEL=52 CTEST_PARALLEL_LEVEL=1 ctest -V --output-on-failure --resource-spec-file /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5965/scream/components/eamxx/ctest-build/release/ctest_resource_file.json -DNO_SUBMIT=True -DBUILD_WORK_DIR=/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5965/scream/components/eamxx/ctest-build/release -DBUILD_NAME_MOD=release -S /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5965/scream/components/eamxx/cmake/ctest_script.cmake -DCTEST_SITE=weaver -DCMAKE_COMMAND="-C /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5965/scream/components/eamxx/cmake/machine-files/weaver.cmake -DNetCDF_Fortran_PATH=/projects/ppc64le-pwr9-rhel8/tpls/netcdf-fortran/4.6.1/gcc/11.3.0/openmpi/4.1.6/5tv5psl -DNetCDF_C_PATH=/projects/ppc64le-pwr9-rhel8/tpls/netcdf-c/4.9.2/gcc/11.3.0/openmpi/4.1.6/pyuuqd3 -DPnetCDF_C_PATH=/projects/ppc64le-pwr9-rhel8/tpls/parallel-netcdf/1.12.3/gcc/11.3.0/openmpi/4.1.6/2s52shy -DCMAKE_BUILD_TYPE=Release -DEKAT_DISABLE_TPL_WARNINGS='\''\'\'''\''ON'\''\'\'''\'' -DCMAKE_CXX_COMPILER=mpicxx -DCMAKE_C_COMPILER=mpicc -DCMAKE_Fortran_COMPILER=mpifort -DSCREAM_DYNAMICS_DYCORE=HOMME -DSCREAM_TEST_MAX_TOTAL_THREADS=1 -DSCREAM_BASELINES_DIR=/home/projects/e3sm/scream/pr-autotester/master-baselines/weaver/release" '\''
FROM: /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5965/scream/components/eamxx/ctest-build/release
===============================================================================
Testing '\''c3c7c165225612a6ef1e0c046f8f4b8d5f5a4ecd'\'' for test '\''full_debug'\''
===============================================================================
RUN: taskset -c 0-51 sh -c '\''SCREAM_BUILD_PARALLEL_LEVEL=52 CTEST_PARALLEL_LEVEL=1 ctest -V --output-on-failure --resource-spec-file /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5965/scream/components/eamxx/ctest-build/full_debug/ctest_resource_file.json -DNO_SUBMIT=True -DBUILD_WORK_DIR=/home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5965/scream/components/eamxx/ctest-build/full_debug -DBUILD_NAME_MOD=full_debug -S /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5965/scream/components/eamxx/cmake/ctest_script.cmake -DCTEST_SITE=weaver -DCMAKE_COMMAND="-C /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5965/scream/components/eamxx/cmake/machine-files/weaver.cmake -DNetCDF_Fortran_PATH=/projects/ppc64le-pwr9-rhel8/tpls/netcdf-fortran/4.6.1/gcc/11.3.0/openmpi/4.1.6/5tv5psl -DNetCDF_C_PATH=/projects/ppc64le-pwr9-rhel8/tpls/netcdf-c/4.9.2/gcc/11.3.0/openmpi/4.1.6/pyuuqd3 -DPnetCDF_C_PATH=/projects/ppc64le-pwr9-rhel8/tpls/parallel-netcdf/1.12.3/gcc/11.3.0/openmpi/4.1.6/2s52shy -DCMAKE_BUILD_TYPE=Debug -DEKAT_DEFAULT_BFB=True -DKokkos_ENABLE_DEBUG_BOUNDS_CHECK=True -DEKAT_DISABLE_TPL_WARNINGS='\''\'\'''\''ON'\''\'\'''\'' -DCMAKE_CXX_COMPILER=mpicxx -DCMAKE_C_COMPILER=mpicc -DCMAKE_Fortran_COMPILER=mpifort -DSCREAM_DYNAMICS_DYCORE=HOMME -DSCREAM_TEST_MAX_TOTAL_THREADS=1 -DSCREAM_BASELINES_DIR=/home/projects/e3sm/scream/pr-autotester/master-baselines/weaver/full_debug" '\''
FROM: /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5965/scream/components/eamxx/ctest-build/full_debug
Build type full_debug failed at testing time. Here'\''s a list of failed tests:
110:mam4_wetscav_standalone_baseline_cmp
147:homme_shoc_cld_spa_p3_rrtmgp_mam4_wetscav_baseline_cmp

Build type full_sp_debug failed at testing time. Here'''s a list of failed tests:
95:mam4_wetscav_standalone_baseline_cmp

Build type release failed at testing time. Here'''s a list of failed tests:
109:mam4_wetscav_standalone_baseline_cmp
146:homme_shoc_cld_spa_p3_rrtmgp_mam4_wetscav_baseline_cmp

Error(s) occurred during test phase
OVERALL STATUS: FAIL
Starting analysis on weaver with cmd: cd /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5965/scream/components/eamxx && source /etc/profile.d/modules.sh && module purge && module load cmake/3.25.1 git/2.39.1 python/3.10.8 py-netcdf4/1.5.8 gcc/11.3.0 cuda/11.8.0 openmpi netcdf-c netcdf-fortran parallel-netcdf netlib-lapack && export HDF5_USE_FILE_LOCKING=FALSE && true && bsub -I -q rhel8 -n 4 -gpu num=4 ./scripts/test-all-scream --baseline-dir AUTO $compiler -p -c EKAT_DISABLE_TPL_WARNINGS=ON -m weaver
RUN: cd /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5965/scream/components/eamxx && source /etc/profile.d/modules.sh && module purge && module load cmake/3.25.1 git/2.39.1 python/3.10.8 py-netcdf4/1.5.8 gcc/11.3.0 cuda/11.8.0 openmpi netcdf-c netcdf-fortran parallel-netcdf netlib-lapack && export HDF5_USE_FILE_LOCKING=FALSE && true && bsub -I -q rhel8 -n 4 -gpu num=4 ./scripts/test-all-scream --baseline-dir AUTO $compiler -p -c EKAT_DISABLE_TPL_WARNINGS=ON -m weaver
FROM: /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5965/scream/components/eamxx
weaver failed'

  • errors='Build type full_debug failed at testing time. Here'''s a list of failed tests:
    110:mam4_wetscav_standalone_baseline_cmp
    147:homme_shoc_cld_spa_p3_rrtmgp_mam4_wetscav_baseline_cmp

Build type full_sp_debug failed at testing time. Here'''s a list of failed tests:
95:mam4_wetscav_standalone_baseline_cmp

Build type release failed at testing time. Here'''s a list of failed tests:
109:mam4_wetscav_standalone_baseline_cmp
146:homme_shoc_cld_spa_p3_rrtmgp_mam4_wetscav_baseline_cmp

Error(s) occurred during test phase
OVERALL STATUS: FAIL
Starting analysis on weaver with cmd: cd /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5965/scream/components/eamxx && source /etc/profile.d/modules.sh && module purge && module load cmake/3.25.1 git/2.39.1 python/3.10.8 py-netcdf4/1.5.8 gcc/11.3.0 cuda/11.8.0 openmpi netcdf-c netcdf-fortran parallel-netcdf netlib-lapack && export HDF5_USE_FILE_LOCKING=FALSE && true && bsub -I -q rhel8 -n 4 -gpu num=4 ./scripts/test-all-scream --baseline-dir AUTO $compiler -p -c EKAT_DISABLE_TPL_WARNINGS=ON -m weaver
RUN: cd /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5965/scream/components/eamxx && source /etc/profile.d/modules.sh && module purge && module load cmake/3.25.1 git/2.39.1 python/3.10.8 py-netcdf4/1.5.8 gcc/11.3.0 cuda/11.8.0 openmpi netcdf-c netcdf-fortran parallel-netcdf netlib-lapack && export HDF5_USE_FILE_LOCKING=FALSE && true && bsub -I -q rhel8 -n 4 -gpu num=4 ./scripts/test-all-scream --baseline-dir AUTO $compiler -p -c EKAT_DISABLE_TPL_WARNINGS=ON -m weaver
FROM: /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5965/scream/components/eamxx
weaver failed'

  • SA_FAILURES_DETAILS+='Build type full_debug failed at testing time. Here'''s a list of failed tests:
    110:mam4_wetscav_standalone_baseline_cmp
    147:homme_shoc_cld_spa_p3_rrtmgp_mam4_wetscav_baseline_cmp

Build type full_sp_debug failed at testing time. Here'''s a list of failed tests:
95:mam4_wetscav_standalone_baseline_cmp

Build type release failed at testing time. Here'''s a list of failed tests:
109:mam4_wetscav_standalone_baseline_cmp
146:homme_shoc_cld_spa_p3_rrtmgp_mam4_wetscav_baseline_cmp

Error(s) occurred during test phase
OVERALL STATUS: FAIL
Starting analysis on weaver with cmd: cd /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5965/scream/components/eamxx && source /etc/profile.d/modules.sh && module purge && module load cmake/3.25.1 git/2.39.1 python/3.10.8 py-netcdf4/1.5.8 gcc/11.3.0 cuda/11.8.0 openmpi netcdf-c netcdf-fortran parallel-netcdf netlib-lapack && export HDF5_USE_FILE_LOCKING=FALSE && true && bsub -I -q rhel8 -n 4 -gpu num=4 ./scripts/test-all-scream --baseline-dir AUTO $compiler -p -c EKAT_DISABLE_TPL_WARNINGS=ON -m weaver
RUN: cd /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5965/scream/components/eamxx && source /etc/profile.d/modules.sh && module purge && module load cmake/3.25.1 git/2.39.1 python/3.10.8 py-netcdf4/1.5.8 gcc/11.3.0 cuda/11.8.0 openmpi netcdf-c netcdf-fortran parallel-netcdf netlib-lapack && export HDF5_USE_FILE_LOCKING=FALSE && true && bsub -I -q rhel8 -n 4 -gpu num=4 ./scripts/test-all-scream --baseline-dir AUTO $compiler -p -c EKAT_DISABLE_TPL_WARNINGS=ON -m weaver
FROM: /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5965/scream/components/eamxx
weaver failed'

  • [[ 1 == 0 ]]
  • [[ weaver == \m\a\p\p\y ]]
  • set +x
    ######################################################
    FAILS DETECTED:
    SCREAM STANDALONE TESTING FAILED!
    Build type full_debug failed at testing time. Here's a list of failed tests:
    110:mam4_wetscav_standalone_baseline_cmp
    147:homme_shoc_cld_spa_p3_rrtmgp_mam4_wetscav_baseline_cmp

Build type full_sp_debug failed at testing time. Here's a list of failed tests:
95:mam4_wetscav_standalone_baseline_cmp

Build type release failed at testing time. Here's a list of failed tests:
109:mam4_wetscav_standalone_baseline_cmp
146:homme_shoc_cld_spa_p3_rrtmgp_mam4_wetscav_baseline_cmp

Error(s) occurred during test phase
OVERALL STATUS: FAIL
Starting analysis on weaver with cmd: cd /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5965/scream/components/eamxx && source /etc/profile.d/modules.sh && module purge && module load cmake/3.25.1 git/2.39.1 python/3.10.8 py-netcdf4/1.5.8 gcc/11.3.0 cuda/11.8.0 openmpi netcdf-c netcdf-fortran parallel-netcdf netlib-lapack && export HDF5_USE_FILE_LOCKING=FALSE && true && bsub -I -q rhel8 -n 4 -gpu num=4 ./scripts/test-all-scream --baseline-dir AUTO $compiler -p -c EKAT_DISABLE_TPL_WARNINGS=ON -m weaver
RUN: cd /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5965/scream/components/eamxx && source /etc/profile.d/modules.sh && module purge && module load cmake/3.25.1 git/2.39.1 python/3.10.8 py-netcdf4/1.5.8 gcc/11.3.0 cuda/11.8.0 openmpi netcdf-c netcdf-fortran parallel-netcdf netlib-lapack && export HDF5_USE_FILE_LOCKING=FALSE && true && bsub -I -q rhel8 -n 4 -gpu num=4 ./scripts/test-all-scream --baseline-dir AUTO $compiler -p -c EKAT_DISABLE_TPL_WARNINGS=ON -m weaver
FROM: /home/e3sm-jenkins/weaver/workspace/SCREAM_PullRequest_Autotester_Weaver/5965/scream/components/eamxx
weaver failed
######################################################
Build step 'Execute shell' marked build as failure
Performing Post build task...
Match found for : : True
Logical operation result is TRUE
Running script : #!/bin/bash -le

cd $WORKSPACE/${BUILD_ID}/

./scream/components/eamxx/scripts/jenkins/jenkins_cleanup.sh
[SCREAM_PullRequest_Autotester_Weaver] $ /bin/bash -le /tmp/jenkins3606986647388708211.sh
POST BUILD TASK : SUCCESS
END OF POST BUILD TASK : 0
Sending e-mails to: lbertag@sandia.gov
Finished: FAILURE

@bartgol
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bartgol commented Jul 30, 2024

@odiazib @singhbalwinder Should I go ahead and use the force to merge then?

@singhbalwinder
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Yes, this PR has be merge manully as we have some expected fails.I scanned the test failures above and the following are the fails:

DIFF SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-wetscav (phase BASELINE)
    Case dir: /ascldap/users/e3sm-jenkins/acme/scratch/SMS_D_Ln5.ne4pg2_oQU480.F2010-SCREAMv1-MPASSI.mappy_gnu.scream-mam4xx-wetscav.C.20240730_143616_yed0fc

mam4_wetscav_standalone_baseline_cmp
homme_shoc_cld_spa_p3_rrtmgp_mam4_wetscav_baseline_cmp

These are all expected fails (missing baselines for new tests).

@bartgol bartgol merged commit 1d50836 into E3SM-Project:master Jul 30, 2024
13 of 14 checks passed
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9 participants