rename project_id attribute

EBI-Metagenomics · Nov 10, 2017 · 9c390ed · 9c390ed
1 parent f44374e
commit 9c390ed
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Showing 3 changed files with 8 additions and 2 deletions.
diff --git a/emgapi/serializers.py b/emgapi/serializers.py
@@ -689,6 +689,11 @@ class StudySerializer(ExplicitFieldsModelSerializer,
         lookup_field='accession',
     )
 
+    bioproject = serializers.SerializerMethodField()
+
+    def get_bioproject(self, obj):
+        return obj.project_id
+
     # relationships
     biomes = emg_relations.HyperlinkedSerializerMethodResourceRelatedField(
         many=True,
@@ -741,6 +746,7 @@ class Meta:
         exclude = (
             # TODO: remove biome when schema updated
             'biome',
+            'project_id',
             'is_public',
             'experimental_factor',
             'submission_account_id',

diff --git a/tests/integration/test_examples.py b/tests/integration/test_examples.py
@@ -51,7 +51,7 @@ def test_list(self, live_server, runs, api_version):
                 for run in run_list:
                     print(
                         study.accession,
-                        study.project_id,
+                        study.bioproject,
                         sample.accession,
                         sample.biome.biome_name,
                         sample.runs_count,

diff --git a/tests/integration/test_study.py b/tests/integration/test_study.py
@@ -47,7 +47,7 @@ def test_details(self, client, study):
         assert _attr['study-name'] == "Example study name SRP01234"
         assert _attr['data-origination'] == "HARVESTED"
         assert _attr['last-update'] == "1970-01-01T00:00:00"
-        assert _attr['project-id'] == "PRJDB1234"
+        assert _attr['bioproject'] == "PRJDB1234"
 
     def test_public(self, client, study, study_private):
         url = reverse("emgapi:studies-list")