Support #385

src/edrn.theme/src/edrn/theme/templates/wagtailadmin/base.html

@@ -3,4 +3,4 @@
 {% block branding_logo %}
     <img alt='Logo of the National Institutes of Health' src='{% static "edrn.theme/images/nih.png" %}'/>
 {% endblock %}
-{# -*- Django HTML -*- #}
+{# -*- HTML (Jinja) -*- #}

src/edrn.theme/src/edrn/theme/templates/wagtailadmin/home.html

@@ -3,4 +3,3 @@
 {% block branding_welcome %}
     Editor's Controls for {{site_name}}
 {% endblock %}
-{# -*- Django HTML -*- #}

src/edrn.theme/src/edrn/theme/templates/wagtailadmin/login.html

@@ -20,4 +20,4 @@
 {% block branding_logo %}
 <!-- Sorry, no wagtail logo here -->
 {% endblock %}
-{# -*- Django HTML -*- #}
+{# -*- HTML (Jinja) -*- #}

src/edrnsite.content/src/edrnsite/content/management/commands/edrn_new_explorers.py

@@ -0,0 +1,73 @@
+# encoding: utf-8
+
+'''😌 EDRN Site Content: remove old explorer, create new one.'''
+
+from django.conf import settings
+from django.core.management.base import BaseCommand
+from edrnsite.content.models import FlexPage
+from edrnsite.policy.management.commands.utils import set_site
+from edrnsite.streams.views import update_data_element_explorer_trees
+from wagtail.models import Page
+from wagtail.rich_text import RichText
+
+
+_help_html = '''<p>To use the data models:</p>
+<ul>
+<li>Click/tap on the triangle icon to the left of each section to expand and view its contents.</li>
+<li>Click/tap on the text within a section to access detailed information about the model, including its specific attributes and details.</li>
+</ul>'''
+
+_faq_html = '''<p>For questions about the data models, <a href="mailto:ic-portal@jpl.nasa.gov">email
+the Informatics Center</a>.'''
+
+
+class Command(BaseCommand):
+    help = 'Replace old CDE viewer page with new block-based explorer flex page'
+
+    def _update_cde_explorer(self, home_page):
+        # There should be just one current CDEExplorerPage
+        count = Page.objects.filter(slug='edrn-data-model').count()
+        if count > 1:
+            raise ValueError("There's more than one edrn-data-model! Not sure what to do")
+        elif count == 0:
+            self.stdout.write('No edrn-data-model found, so using existing "cde" page as the parent')
+            parent = FlexPage.objects.filter(slug='cde').first()
+            assert parent is not None
+        else:
+            self.stdout.write('Found the one edrn-data-model, deleting it')
+            page = Page.objects.filter(slug='edrn-data-model').first()
+            parent = page.get_parent()
+            page.delete()
+            parent.refresh_from_db()
+
+        self.stdout.write('Creating new EDRN Data Model page')
+        page = FlexPage(title='EDRN Data Model', slug='edrn-data-model', show_in_menus=False)
+        parent.add_child(instance=page)
+
+        page.body.append(('rich_text', RichText(_help_html)))
+        page.body.append(('data_explorer', {
+            'title': 'Biomarker Data Models',
+            'block_id': 'bio', 'spreadsheet_id': '1Kjkvi-bF5GNpAzvq4Kq6r4g1WpceIyP0Srs2OHJJtGs', 
+        }))
+        page.body.append(('data_explorer', {
+            'title': 'Cancer Biomarker Data Commons (LabCAS) Data Model',
+            'block_id': 'lab', 'spreadsheet_id': '1btbwoROmVbZlzSLBn3DQ_6rakZ48j24p-NoOkI3OCFg'
+        }))
+        page.body.append(('rich_text', RichText(_faq_html)))
+        page.save()
+        update_data_element_explorer_trees()
+
+    def handle(self, *args, **options):
+        self.stdout.write('Updating CDE explorer')
+
+        old = getattr(settings, 'WAGTAILREDIRECTS_AUTO_CREATE', True)
+        try:
+            settings.WAGTAILREDIRECTS_AUTO_CREATE = False
+            settings.WAGTAILSEARCH_BACKENDS['default']['AUTO_UPDATE'] = False
+            site, home_page = set_site()
+            self._update_cde_explorer(home_page)
+
+        finally:
+            settings.WAGTAILREDIRECTS_AUTO_CREATE = old
+            settings.WAGTAILSEARCH_BACKENDS['default']['AUTO_UPDATE'] = True
+            self.stdout.write("Job's done!")

src/edrnsite.content/src/edrnsite/content/migrations/0035_alter_flexpage_body.py

@@ -0,0 +1,160 @@
+# Generated by Django 4.2.17 on 2025-01-10 18:20
+
+from django.db import migrations
+import edrnsite.streams.blocks
+import wagtail.blocks
+import wagtail.contrib.typed_table_block.blocks
+import wagtail.fields
+import wagtail.images.blocks
+
+
+class Migration(migrations.Migration):
+
+    dependencies = [
+        ("edrnsitecontent", "0034_biomarkersubmissionformpage"),
+    ]
+
+    operations = [
+        migrations.AlterField(
+            model_name="flexpage",
+            name="body",
+            field=wagtail.fields.StreamField(
+                [
+                    (
+                        "rich_text",
+                        wagtail.blocks.RichTextBlock(
+                            help_text="Richly formatted text",
+                            icon="doc-full",
+                            label="Rich Text",
+                        ),
+                    ),
+                    (
+                        "cards",
+                        wagtail.blocks.StructBlock(
+                            [
+                                (
+                                    "cards",
+                                    wagtail.blocks.ListBlock(
+                                        wagtail.blocks.StructBlock(
+                                            [
+                                                (
+                                                    "title",
+                                                    wagtail.blocks.CharBlock(
+                                                        help_text="Title of this card, max 100 chars",
+                                                        max_length=100,
+                                                    ),
+                                                )
+                                            ]
+                                        )
+                                    ),
+                                )
+                            ]
+                        ),
+                    ),
+                    ("table", edrnsite.streams.blocks.TableBlock()),
+                    (
+                        "data_explorer",
+                        wagtail.blocks.StructBlock(
+                            [
+                                (
+                                    "attribute_help_text",
+                                    wagtail.blocks.CharBlock(
+                                        default="Click/tap on an attribute box below to view details about each attribute",
+                                        help_text="Helpful text to tell users that attribute buttons can be clicked",
+                                        max_length=300,
+                                        required=False,
+                                    ),
+                                )
+                            ]
+                        ),
+                    ),
+                    (
+                        "block_quote",
+                        edrnsite.streams.blocks.BlockQuoteBlock(
+                            help_text="Block quote"
+                        ),
+                    ),
+                    (
+                        "typed_table",
+                        wagtail.contrib.typed_table_block.blocks.TypedTableBlock(
+                            [
+                                (
+                                    "text",
+                                    wagtail.blocks.CharBlock(
+                                        help_text="Plain text cell"
+                                    ),
+                                ),
+                                (
+                                    "rich_text",
+                                    wagtail.blocks.RichTextBlock(
+                                        help_text="Rich text cell"
+                                    ),
+                                ),
+                                (
+                                    "numeric",
+                                    wagtail.blocks.FloatBlock(help_text="Numeric cell"),
+                                ),
+                                (
+                                    "integer",
+                                    wagtail.blocks.IntegerBlock(
+                                        help_text="Integer cell"
+                                    ),
+                                ),
+                                (
+                                    "page",
+                                    wagtail.blocks.PageChooserBlock(
+                                        help_text="Page within the site"
+                                    ),
+                                ),
+                            ]
+                        ),
+                    ),
+                    (
+                        "carousel",
+                        wagtail.blocks.StructBlock(
+                            [
+                                (
+                                    "media",
+                                    wagtail.blocks.ListBlock(
+                                        wagtail.blocks.StructBlock(
+                                            [
+                                                (
+                                                    "image",
+                                                    wagtail.images.blocks.ImageChooserBlock(),
+                                                ),
+                                                (
+                                                    "label",
+                                                    wagtail.blocks.CharBlock(
+                                                        help_text="Overlaid label, if any",
+                                                        max_length=120,
+                                                        required=False,
+                                                    ),
+                                                ),
+                                                (
+                                                    "caption",
+                                                    wagtail.blocks.CharBlock(
+                                                        help_text="Overlaid caption, if any",
+                                                        max_length=400,
+                                                        required=False,
+                                                    ),
+                                                ),
+                                            ]
+                                        )
+                                    ),
+                                )
+                            ]
+                        ),
+                    ),
+                    (
+                        "raw_html",
+                        wagtail.blocks.RawHTMLBlock(
+                            help_text="Raw HTML (use with care)"
+                        ),
+                    ),
+                ],
+                blank=True,
+                null=True,
+                use_json_field=True,
+            ),
+        ),
+    ]