trying to make pip installable in edit mode

ELGarulli · Aug 28, 2024 · 8268ad5 · 8268ad5
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diff --git a/.github/workflows/ci_test.yaml b/.github/workflows/ci_test.yaml
@@ -30,5 +30,9 @@ jobs:
       - name: Install dependencies
         run: python -m pip install pytest .
 
+      - name: Install the package
+          run: |
+            pip install -e .
+
       - name: Run tests
         run: pytest
diff --git a/neurokin/tests/utils/helper/__init__.py → tests/__init__.py b/neurokin/tests/utils/helper/__init__.py → tests/__init__.py
diff --git a/...ntinuous/Rhythm_FPGA-100.0/continuous.dat → ...ntinuous/Rhythm_FPGA-100.0/continuous.dat b/...ntinuous/Rhythm_FPGA-100.0/continuous.dat → ...ntinuous/Rhythm_FPGA-100.0/continuous.dat
diff --git a/...hm_FPGA-100.0/synchronized_timestamps.npy → ...hm_FPGA-100.0/synchronized_timestamps.npy b/...hm_FPGA-100.0/synchronized_timestamps.npy → ...hm_FPGA-100.0/synchronized_timestamps.npy
diff --git a/...ntinuous/Rhythm_FPGA-100.0/timestamps.npy → ...ntinuous/Rhythm_FPGA-100.0/timestamps.npy b/...ntinuous/Rhythm_FPGA-100.0/timestamps.npy → ...ntinuous/Rhythm_FPGA-100.0/timestamps.npy
diff --git a/...ge_Center-904.0/TEXT_group_1/channels.npy → ...ge_Center-904.0/TEXT_group_1/channels.npy b/...ge_Center-904.0/TEXT_group_1/channels.npy → ...ge_Center-904.0/TEXT_group_1/channels.npy
diff --git a/...essage_Center-904.0/TEXT_group_1/text.npy → ...essage_Center-904.0/TEXT_group_1/text.npy b/...essage_Center-904.0/TEXT_group_1/text.npy → ...essage_Center-904.0/TEXT_group_1/text.npy
diff --git a/..._Center-904.0/TEXT_group_1/timestamps.npy → ..._Center-904.0/TEXT_group_1/timestamps.npy b/..._Center-904.0/TEXT_group_1/timestamps.npy → ..._Center-904.0/TEXT_group_1/timestamps.npy
diff --git a/...hythm_FPGA-100.0/TTL_1/channel_states.npy → ...hythm_FPGA-100.0/TTL_1/channel_states.npy b/...hythm_FPGA-100.0/TTL_1/channel_states.npy → ...hythm_FPGA-100.0/TTL_1/channel_states.npy
diff --git a/...ents/Rhythm_FPGA-100.0/TTL_1/channels.npy → ...ents/Rhythm_FPGA-100.0/TTL_1/channels.npy b/...ents/Rhythm_FPGA-100.0/TTL_1/channels.npy → ...ents/Rhythm_FPGA-100.0/TTL_1/channels.npy
diff --git a/...ts/Rhythm_FPGA-100.0/TTL_1/full_words.npy → ...ts/Rhythm_FPGA-100.0/TTL_1/full_words.npy b/...ts/Rhythm_FPGA-100.0/TTL_1/full_words.npy → ...ts/Rhythm_FPGA-100.0/TTL_1/full_words.npy
diff --git a/...ts/Rhythm_FPGA-100.0/TTL_1/timestamps.npy → ...ts/Rhythm_FPGA-100.0/TTL_1/timestamps.npy b/...ts/Rhythm_FPGA-100.0/TTL_1/timestamps.npy → ...ts/Rhythm_FPGA-100.0/TTL_1/timestamps.npy
diff --git a/...02/experiment1/recording1/structure.oebin → ...02/experiment1/recording1/structure.oebin b/...02/experiment1/recording1/structure.oebin → ...02/experiment1/recording1/structure.oebin
diff --git a/.../experiment1/recording1/sync_messages.txt → .../experiment1/recording1/sync_messages.txt b/.../experiment1/recording1/sync_messages.txt → .../experiment1/recording1/sync_messages.txt
diff --git a/...OE_test_data/Record Node 102/settings.xml → ...OE_test_data/Record Node 102/settings.xml b/...OE_test_data/Record Node 102/settings.xml → ...OE_test_data/Record Node 102/settings.xml
diff --git a/...n/tests/test_data/TDT_test_data/Notes.txt → tests/test_data/TDT_test_data/Notes.txt b/...n/tests/test_data/TDT_test_data/Notes.txt → tests/test_data/TDT_test_data/Notes.txt
diff --git a/...test_data/TDT_test_data/StoresListing.txt → ...test_data/TDT_test_data/StoresListing.txt b/...test_data/TDT_test_data/StoresListing.txt → ...test_data/TDT_test_data/StoresListing.txt
diff --git a/...tests/test_data/TDT_test_data/desktop.ini → tests/test_data/TDT_test_data/desktop.ini b/...tests/test_data/TDT_test_data/desktop.ini → tests/test_data/TDT_test_data/desktop.ini
diff --git a/...-230509-155033_NWE00158-230530-101235.Tbk → ...-230509-155033_NWE00158-230530-101235.Tbk b/...-230509-155033_NWE00158-230530-101235.Tbk → ...-230509-155033_NWE00158-230530-101235.Tbk
diff --git a/...-230509-155033_NWE00158-230530-101235.Tdx → ...-230509-155033_NWE00158-230530-101235.Tdx b/...-230509-155033_NWE00158-230530-101235.Tdx → ...-230509-155033_NWE00158-230530-101235.Tdx
diff --git a/...-230509-155033_NWE00158-230530-101235.tev → ...-230509-155033_NWE00158-230530-101235.tev b/...-230509-155033_NWE00158-230530-101235.tev → ...-230509-155033_NWE00158-230530-101235.tev
diff --git a/...-230509-155033_NWE00158-230530-101235.tin → ...-230509-155033_NWE00158-230530-101235.tin b/...-230509-155033_NWE00158-230530-101235.tin → ...-230509-155033_NWE00158-230530-101235.tin
diff --git a/...-230509-155033_NWE00158-230530-101235.tnt → ...-230509-155033_NWE00158-230530-101235.tnt b/...-230509-155033_NWE00158-230530-101235.tnt → ...-230509-155033_NWE00158-230530-101235.tnt
diff --git a/...-230509-155033_NWE00158-230530-101235.tsq → ...-230509-155033_NWE00158-230530-101235.tsq b/...-230509-155033_NWE00158-230530-101235.tsq → ...-230509-155033_NWE00158-230530-101235.tsq
diff --git a/...n/tests/test_data/config_test/config.yaml → tests/test_data/config_test/config.yaml b/...n/tests/test_data/config_test/config.yaml → tests/test_data/config_test/config.yaml
diff --git a/...t_data/230428/NWE00159/15/15_FEATURES.csv → ...t_data/230428/NWE00159/15/15_FEATURES.csv b/...t_data/230428/NWE00159/15/15_FEATURES.csv → ...t_data/230428/NWE00159/15/15_FEATURES.csv
diff --git a/...00159/15/NWE00159-230428-105347/Notes.txt → ...00159/15/NWE00159-230428-105347/Notes.txt b/...00159/15/NWE00159-230428-105347/Notes.txt → ...00159/15/NWE00159-230428-105347/Notes.txt
diff --git a/.../NWE00159-230428-105347/StoresListing.txt → .../NWE00159-230428-105347/StoresListing.txt b/.../NWE00159-230428-105347/StoresListing.txt → .../NWE00159-230428-105347/StoresListing.txt
diff --git a/...-220822-111845_NWE00159-230428-105347.Tbk → ...-220822-111845_NWE00159-230428-105347.Tbk b/...-220822-111845_NWE00159-230428-105347.Tbk → ...-220822-111845_NWE00159-230428-105347.Tbk
diff --git a/...-220822-111845_NWE00159-230428-105347.Tdx → ...-220822-111845_NWE00159-230428-105347.Tdx b/...-220822-111845_NWE00159-230428-105347.Tdx → ...-220822-111845_NWE00159-230428-105347.Tdx
diff --git a/...-220822-111845_NWE00159-230428-105347.tev → ...-220822-111845_NWE00159-230428-105347.tev b/...-220822-111845_NWE00159-230428-105347.tev → ...-220822-111845_NWE00159-230428-105347.tev
diff --git a/...-220822-111845_NWE00159-230428-105347.tin → ...-220822-111845_NWE00159-230428-105347.tin b/...-220822-111845_NWE00159-230428-105347.tin → ...-220822-111845_NWE00159-230428-105347.tin
diff --git a/...-220822-111845_NWE00159-230428-105347.tnt → ...-220822-111845_NWE00159-230428-105347.tnt b/...-220822-111845_NWE00159-230428-105347.tnt → ...-220822-111845_NWE00159-230428-105347.tnt
diff --git a/...-220822-111845_NWE00159-230428-105347.tsq → ...-220822-111845_NWE00159-230428-105347.tsq b/...-220822-111845_NWE00159-230428-105347.tsq → ...-220822-111845_NWE00159-230428-105347.tsq
diff --git a/...159/15/NWE00159-230428-105347/desktop.ini → ...159/15/NWE00159-230428-105347/desktop.ini b/...159/15/NWE00159-230428-105347/desktop.ini → ...159/15/NWE00159-230428-105347/desktop.ini
diff --git a/...test_data/230428/NWE00159/15/runway15.c3d → ...test_data/230428/NWE00159/15/runway15.c3d b/...test_data/230428/NWE00159/15/runway15.c3d → ...test_data/230428/NWE00159/15/runway15.c3d
diff --git a/...test_data/230428/NWE00159/15/runway15.csv → ...test_data/230428/NWE00159/15/runway15.csv b/...test_data/230428/NWE00159/15/runway15.csv → ...test_data/230428/NWE00159/15/runway15.csv
diff --git a/...00163/13/NWE00163-230619-131710/Notes.txt → ...00163/13/NWE00163-230619-131710/Notes.txt b/...00163/13/NWE00163-230619-131710/Notes.txt → ...00163/13/NWE00163-230619-131710/Notes.txt
diff --git a/.../NWE00163-230619-131710/StoresListing.txt → .../NWE00163-230619-131710/StoresListing.txt b/.../NWE00163-230619-131710/StoresListing.txt → .../NWE00163-230619-131710/StoresListing.txt
diff --git a/...163/13/NWE00163-230619-131710/desktop.ini → ...163/13/NWE00163-230619-131710/desktop.ini b/...163/13/NWE00163-230619-131710/desktop.ini → ...163/13/NWE00163-230619-131710/desktop.ini
diff --git a/...-230509-155033_NWE00163-230619-131710.Tbk → ...-230509-155033_NWE00163-230619-131710.Tbk b/...-230509-155033_NWE00163-230619-131710.Tbk → ...-230509-155033_NWE00163-230619-131710.Tbk
diff --git a/...-230509-155033_NWE00163-230619-131710.Tdx → ...-230509-155033_NWE00163-230619-131710.Tdx b/...-230509-155033_NWE00163-230619-131710.Tdx → ...-230509-155033_NWE00163-230619-131710.Tdx
diff --git a/...-230509-155033_NWE00163-230619-131710.tev → ...-230509-155033_NWE00163-230619-131710.tev b/...-230509-155033_NWE00163-230619-131710.tev → ...-230509-155033_NWE00163-230619-131710.tev
diff --git a/...-230509-155033_NWE00163-230619-131710.tin → ...-230509-155033_NWE00163-230619-131710.tin b/...-230509-155033_NWE00163-230619-131710.tin → ...-230509-155033_NWE00163-230619-131710.tin
diff --git a/...-230509-155033_NWE00163-230619-131710.tnt → ...-230509-155033_NWE00163-230619-131710.tnt b/...-230509-155033_NWE00163-230619-131710.tnt → ...-230509-155033_NWE00163-230619-131710.tnt
diff --git a/...-230509-155033_NWE00163-230619-131710.tsq → ...-230509-155033_NWE00163-230619-131710.tsq b/...-230509-155033_NWE00163-230619-131710.tsq → ...-230509-155033_NWE00163-230619-131710.tsq
diff --git a/...est_data/230619/NWE00163/13/runway_13.c3d → ...est_data/230619/NWE00163/13/runway_13.c3d b/...est_data/230619/NWE00163/13/runway_13.c3d → ...est_data/230619/NWE00163/13/runway_13.c3d
diff --git a/...est_data/230619/NWE00163/13/runway_13.csv → ...est_data/230619/NWE00163/13/runway_13.csv b/...est_data/230619/NWE00163/13/runway_13.csv → ...est_data/230619/NWE00163/13/runway_13.csv
diff --git a/...sts/test_data/steps_test_data/steps_y.pkl → tests/test_data/steps_test_data/steps_y.pkl b/...sts/test_data/steps_test_data/steps_y.pkl → tests/test_data/steps_test_data/steps_y.pkl
diff --git a/neurokin/tests/utils/kinematics/__init__.py → tests/utils/__init__.py b/neurokin/tests/utils/kinematics/__init__.py → tests/utils/__init__.py
diff --git a/neurokin/tests/utils/neural/__init__.py → tests/utils/helper/__init__.py b/neurokin/tests/utils/neural/__init__.py → tests/utils/helper/__init__.py
diff --git a/...in/tests/utils/helper/test_load_config.py → tests/utils/helper/test_load_config.py b/...in/tests/utils/helper/test_load_config.py → tests/utils/helper/test_load_config.py
diff --git a/tests/utils/kinematics/__init__.py b/tests/utils/kinematics/__init__.py
diff --git a/...tils/kinematics/test_c3d_import_export.py → ...tils/kinematics/test_c3d_import_export.py b/...tils/kinematics/test_c3d_import_export.py → ...tils/kinematics/test_c3d_import_export.py
diff --git a/.../utils/kinematics/test_event_detection.py → .../utils/kinematics/test_event_detection.py b/.../utils/kinematics/test_event_detection.py → .../utils/kinematics/test_event_detection.py
diff --git a/...ils/kinematics/test_gait_params_basics.py → ...ils/kinematics/test_gait_params_basics.py b/...ils/kinematics/test_gait_params_basics.py → ...ils/kinematics/test_gait_params_basics.py
diff --git a/.../kinematics/test_kinematics_processing.py → .../kinematics/test_kinematics_processing.py b/.../kinematics/test_kinematics_processing.py → .../kinematics/test_kinematics_processing.py
diff --git a/tests/utils/neural/__init__.py b/tests/utils/neural/__init__.py
diff --git a/...okin/tests/utils/neural/test_importing.py → tests/utils/neural/test_importing.py b/...okin/tests/utils/neural/test_importing.py → tests/utils/neural/test_importing.py
diff --git a/...kin/tests/utils/neural/test_processing.py → tests/utils/neural/test_processing.py b/...kin/tests/utils/neural/test_processing.py → tests/utils/neural/test_processing.py