Skip to content

v2.2.0
Compare
Choose a tag to compare
@leepc12 leepc12 released this 13 Jun 20:34
· 37 commits to master since this release
v2.2.0
c10d05b
This commit was created on GitHub.com and signed with GitHub’s verified signature. The key has expired.
GPG key ID: 4AEE18F83AFDEB23
Expired
Learn about vigilant mode.

Deprecated scg and sherlock backends.
Use slurm backend instead and follow instruction on Caper's conf ~/.caper/default.conf after caper init slurm.

New HPC feature

  • Unified command caper hpc for all HPC backend types (slurm, sge, pbs and lsf).
  • caper hpc submit WDL -i INPUT.json --leader-job-name GOOD_NAME_FOR_LEADER [--conda | --singularity]
  • caper hpc list: shows all Caper leader jobs
  • caper hpc abort JOB_ID: terminate a Caper leader job including child jobs

Default walltime for a leader job is 48 hours by default. Check Caper's conf ~/.caper/default.conf to change it.

Assets 2
Loading