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@leepc12 leepc12 released this 16 Nov 02:04
· 417 commits to master since this release
v1.3.4
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Learn about vigilant mode.

IMPORTANT: Update Caper and Croo for a task graph in a Croo HTML report. Old Croo will not work with old pipeline's metadata.json.

$ pip install --upgrade caper croo

IMPORTANT: Conda users must update their environment.

$ bash scripts/update_conda_env.sh

Task graph on Croo report.

  • updated the output definition JSON file on pipeline's side.

Default parameter changes

  • chip.macs2_signal_track_disks: 200 GB -> 400 GB
    • to prevent possible PAPI error 10 error.

WDL

  • For a task macs2_signal_track_disks preemption is now allowed on GCP.

Bug fixes

  • updated documentation for Conda installation for OSX users.
    • OSX users need to install GNU grep.
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