Skip to content

Ecological-Complexity-Lab/svd_based_spatial_prediction

Repository files navigation

👋 About

This repository contains the code and data for the paper: "Predicting missing ecological interactions across space using latent patterns in network structure" - Currently writing in progress.

📄 Paper and citing

Kesem Abramov, Barry Biton, Geut Galai, Rami Puzis, and Shai Pilosof. Predicting missing ecological interactions across space using latent patterns in network structure. EcoEvoRxiv? (preprint) 2025. DOI:TBD.

Abstract:

Our work provides a methodological framework for choosing the right source of additional information to complete missing interaction data in a target location. In this work we attempted to quantify the effects of spatial context on predictive capacity.

📁 Folder breakdown:

Detailed in the repository Wiki (under "Directories").

🗄️ Data used:

Detailed in the repository Wiki (under "Data").

💻 Code:

Detailed in the repository Wiki (under "Code").

About

predicting links using softImpute

Resources

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published