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BayesTools 0.2.14

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@FBartos FBartos released this 30 May 13:14
· 4 commits to master since this release
cd35182

Features

  • adding contrast = "meandif" to the prior_factor function which generates identical prior distributions for difference between the grand mean and each factor level
  • adding contrast = "independent" to the prior_factor function which generates independent identical prior distributions for each factor level
  • remove_column function for removing columns from BayesTools_table objects without breaking the attributes etc...
  • adding empty table functions (#10)
  • adding remove_parameters argument to model_summary_table()
  • adding multivariate point distribution functions
  • adding point prior distribution as option to prior_factor with "meandif" and "orthonormal" contrasts
  • adding marginal_posterior() function which creates marginal prior and posterior distributions (according to a model formula specification)
  • adding Savage_Dickey_BF() function to compute density ratio Bayes factors based on marginal_posterior objects
  • adding marginal_inference() function to combine information from marginal_posterior() and Savage_Dickey_BF()
  • adding marginal_estimates_table() function to summarize marginal_inference() objects
  • adding plot_marginal() function to visualize marginal_inference() objects

Changes

  • contrast = "meandif" is now the default setting for prior_factor function
  • depreciating transform_orthonormal argument in favor of more general transform_factors argument
  • switching dummy contrast/factor attributes to treatment for consistency (#23)

Fixes

  • zero length inputs to check_bool(), check_char(), check_real(), check_int(), and check_list() do not throw error if allow_NULL = TRUE
  • properly aggregating identical priors in the plotting function (previously overlying multiple spikes on top of each other when attributes did not match)
  • student-t allowed as a prior distribution name
  • fixing factor contrast settings in JAGS_evaluate_formula
  • fixing spike prior transformations